Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_002513.1 Length=33034 Score E Sequences producing significant alignments: (Bits) Value seq169466 111 3e-20 >seq169466 Length=306 Score = 111 bits (122), Expect = 3e-20 Identities = 177/250 (71%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 12914 GGGGTTAAGTTTGACACACGGAACTTTAGGCTGGGCTACGACCCTGTGACTGGCTTAGTT 12973 ||||| ||||||||||| || ||||| || ||||| | ||||| || ||||| | || Sbjct 269 GGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTC 210 Query 12974 ATG-CCTGGAAAGTACATTAACATGGCCGTCCACCCAGATATTATTTTGGCTCCTGGCT- 13031 ||| ||| || || | ||| ||| |||| ||||| || ||||| ||| | || | Sbjct 209 ATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTT-GCTGCCGGATC 151 Query 13032 GCGCCGTAGACTTTACTACGAGCCGCTTAAACAACTTGCTTGGCATTCGGAAAAGGCTTC 13091 || || ||||| || |||||| | | ||||||| | ||||| || || ||| | Sbjct 150 CCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAAC 91 Query 13092 CATTCCAAGAGGGATTTCAGATCACTTATGAAGATTTAGTTGGGGGAAACATTCCTGCGC 13151 | ||||| ||||| ||| |||||| || || || | | || || |||||||| || | Sbjct 90 CCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCAC 31 Query 13152 TGCTAGATGT 13161 || | ||||| Sbjct 30 TGTTGGATGT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105205528668800