Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_002641.1 Length=159160 Score E Sequences producing significant alignments: (Bits) Value seq13 116 4e-21 >seq13 Length=17727969 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 125079 GCCGCTCATGCCCGCCCGTGCCGTGCTTACCCATCCGCCGTGCTCCCGCAACCACTCGCC 125138 ||||||| |||||| || ||| |||||||||||||||||| || ||||||||| Sbjct 5935638 GCCGCTCCCCGCCGCCCCGTCCCCGCTCACCCATCCGCCGTGCTCCTCCAGCCACTCGCC 5935579 Query 125139 CTGCTCTTCGGCCAGGTACGCGGCCAGCGCTGCGGCCAAGCGGCTTGGCCCTTCCTCACA 125198 |||| ||||||||||| |||||||| ||||||| || || ||||| || || Sbjct 5935578 GCGCTCCTCGGCCAGGTAGGCGGCCAGGTGAGCGGCCAGGCAGCGCGGCCCGTCGCTGCA 5935519 Query 125199 GCCGTTTTCGTACAGCGCCGTTGCCAGCGAGCCGCCGAGGACTATGGTCGCCAGGCATCG 125258 ||| ||| |||||| | ||||||| |||| ||| || | | |||||| || Sbjct 5935518 GCCCCGCTCGGCCAGCGCGGCCGCCAGCGTGCCGGCGAACACCACGAGCGCCAGCAGCCG 5935459 Query 125259 ACCCCAGTTGAAGCCGC 125275 |||||||||| ||||| Sbjct 5935458 GCCCCAGTTGAGGCCGC 5935442 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 157321 GCGGCTTCAACTGGGGTCGATGCCTGGCGACCATAGTCCTCGGCGGCTCGCTGGCAACGG 157380 ||||| |||||||||| || |||||| | | || ||| |||| ||||||| | | Sbjct 5935442 GCGGCCTCAACTGGGGCCGGCTGCTGGCGCTCGTGGTGTTCGCCGGCACGCTGGCGGCCG 5935501 Query 157381 CGCTGTACGAAAACGGCTGTGAGGAAGGGCCAAGCCGCTTGGCCGCAGCGCTGGCCGCGT 157440 ||||| ||| ||||| || ||||| || || ||||||| |||||||| | Sbjct 5935502 CGCTGGCCGAGCGGGGCTGCAGCGACGGGCCGCGCTGCCTGGCCGCTCACCTGGCCGCCT 5935561 Query 157441 ACCTGGCCGAAGAGCAGGGCGAGTGGTTGCGGGAGCACGGCGGATGGGTAAGCACGGCAC 157500 |||||||||| |||| ||||||||| || |||||||||||||||||| ||| || Sbjct 5935562 ACCTGGCCGAGGAGCGCGGCGAGTGGCTGGAGGAGCACGGCGGATGGGTGAGCGGGGACG 5935621 Query 157501 GGGCGGGCATGAGCGGC 157517 |||||| ||||||| Sbjct 5935622 GGGCGGCGGGGAGCGGC 5935638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507246554880000