Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq77 84.2 5e-11 >seq77 Length=1106213 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| ||||| | ||||| || || || ||||||| |||||| ||| || || Sbjct 1097824 CAGCACATGCTGATGAGGGTGGCCGTGGGCATCCACAAGGCTGACATCGAGGCCGCCATC 1097883 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 ||||| |||| | | || |||||| | || || ||| | || |||||||||||| Sbjct 1097884 GAGACCTACAACCTGCTCTCGGAGCGCTGGTTCACCCACGCCTCGCCAACGCTCTTCAAC 1097943 Query 249013 GCCGGTACC 249021 ||||| ||| Sbjct 1097944 GCCGGCACC 1097952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069578576819200