Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq204287 104 2e-17 seq29 82.4 8e-11 >seq204287 Length=600 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || |||||||| || ||||| || || || |||| | Sbjct 305 CGCAGGACAAGGTGCAGAGTTGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 364 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || ||||| ||||||| | ||||| |||||||| || ||||| ||| Sbjct 365 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTG 424 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||| ||||| | || | Sbjct 425 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGAGTGATG 484 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| ||||||||||| || ||||| Sbjct 485 GTCTTGCCAGTCAGGGTTTTTACGAAGATCTGCAT 519 >seq29 Length=9066916 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || ||||| |||||| | |||||||| ||||| ||||| || ||| Sbjct 5719780 TCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATGCCCTCCTTG 5719721 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||||||||||| ||| | Sbjct 5719720 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATA 5719661 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || |||| || || || || || ||||| Sbjct 5719660 GTCTTTCCAGTCAGGGTCTTCACAAAGATCTGCAT 5719626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494176476480000