Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1 114 9e-21 >seq1 Length=88717973 Score = 114 bits (126), Expect = 9e-21 Identities = 139/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| |||| |||||||||||| || ||||| ||||| | || Sbjct 42821905 CATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATC 42821964 Query 25833 TCCATCTTCCCT-GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || || ||||| ||| ||| |||||||| || || | || ||||| || | Sbjct 42821965 ACCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGCGACCCATTAGCAT 42822023 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||||| ||||| || || || || || | Sbjct 42822024 CCCAAATCTTCACACCTTTAGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 42822081 Query 25952 ACAG 25955 |||| Sbjct 42822082 ACAG 42822085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338875732021200