Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15]
304,400 sequences; 1,152,100,110 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq34 86.0 3e-12
seq5 86.0 3e-12
seq13 84.2 1e-11
seq4 82.4 4e-11
>seq34
Length=6596869
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||
Sbjct 3442157 ATTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCA 3442098
Query 11514 ACTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 3442097 ACTGAGCTAACCGGCC 3442082
>seq5
Length=74395783
Score = 86.0 bits (94), Expect = 3e-12
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 927932 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 927991
Query 11528 CCGTCG 11533
||| ||
Sbjct 927992 CCGACG 927997
>seq13
Length=17727969
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 1284490 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 1284549
Query 11515 CTGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 1284550 CTGAGCTAACCGGCC 1284564
>seq4
Length=50638526
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 10099846 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 10099905
Query 11528 CC 11529
||
Sbjct 10099906 CC 10099907
Lambda K H
0.640 0.410 0.922
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260521100334400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |