Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq19 102 7e-17 >seq19 Length=13664266 Score = 102 bits (112), Expect = 7e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | |||||| ||||| ||||| || ||||||||||| | Sbjct 12085326 CCACCCCGCAGGCGCAGCACGAGATGCAGTGTGGATTCCTTCTGGATGTTGTAGTCAGAG 12085385 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| || ||||| ||| | || |||| ||| ||||| ||| Sbjct 12085386 AGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 12085445 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | ||||| | |||||| Sbjct 12085446 ATGCCTTCCTTGTCTTGGATCTTGGC--CTTGACATTTTCAATGGTGTCACTGGGCTCGA 12085503 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||||||||| || || |||| || ||||| || ||||||||||| Sbjct 12085504 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATTTT 12085555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403585174156000