Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_009989.1 Length=27751 Score E Sequences producing significant alignments: (Bits) Value seq169466 82.4 1e-11 >seq169466 Length=306 Score = 82.4 bits (90), Expect = 1e-11 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 12787 TCGGAGTGAAGTTTGACACCCGCAACTTTAAATTAGGGAGAGACCCCGTAACTACCCTTG 12846 |||| || |||||||||||||||||||| | | | ||| ||||| || ||| |||| Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTG 212 Query 12847 TCACTCCC-GGAGCTTACACACACAAAGCATTTCACCCTGACGTTGTTTTGCTGCCGGGC 12905 ||| ||| ||| || ||| || |||| || || || ||| | |||||||||||| Sbjct 211 TCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGAT 152 Query 12906 TGTGGAGTGGACTTTACCAACTCCAGAATCAGCAACATGCTTGG 12949 || |||||||| ||| || | | | |||||| || |||| Sbjct 151 CCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTG-TTGG 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 88372662760800