Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq171425 131 4e-26 seq169466 118 2e-22 >seq171425 Length=537 Score = 131 bits (144), Expect = 4e-26 Identities = 256/367 (70%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 6343 CCTCGAAGGGGTTCATTGGTCCAACAGAGCCTACCTCCTTTCCTAGAACAGAAAGGGGGA 6402 || || ||| | || |||||||| ||||| | || || || | || ||||| || || Sbjct 10 CCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCGGT 69 Query 6403 AGTGGGTCTAGCATAAGT-TCATCGGGAGGGTCTGCATCCATGGTAAAGATTCCCGGAAG 6461 || ||||||||| | || || || || |||||||| |||| |||||||| || || || Sbjct 70 AG-GGGTCTAGC-TGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCAG 127 Query 6462 TAAATCCTTATCAAAATAGCTGATGG-GAGTGGGGTCA--TCTAAGGCCATTTGCCATTC 6518 | | || || ||| || | | || |||| ||| |||||| | Sbjct 128 CAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCAAGTCTAGCGCCTGCTGCCATGC 187 Query 6519 TCGAGCTGCCAGTGCGCGCTCATATGGGTTAAGGGGACTG-CCCCATGGCAT-GGGATGG 6576 || || || || |||||||| |||||||| || || | ||||||||||| ||| ||| Sbjct 188 GCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGGGGGTGG 247 Query 6577 GTGAGTGCAGAGGCATACATGCCAC-AGATGTCATAGACGTAGATGGGATCCTCAAAG-A 6634 ||||| || ||||| |||||||| | | ||||| || ||||||| ||| ||| || | Sbjct 248 GTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTCTCTGAGTA 307 Query 6635 TGCCTATGTAGGTTGGATAGCATCGCCCCCCTCTGATACTTGCTCGCACATAGTCATATA 6694 | || | || || || ||||||| || || | ||| || || ||||| || || |||| Sbjct 308 TTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTAATCGTATA 367 Query 6695 GTTCATG 6701 |||| || Sbjct 368 GTTCGTG 374 >seq169466 Length=306 Score = 118 bits (130), Expect = 2e-22 Identities = 198/284 (70%), Gaps = 2/284 (1%) Strand=Plus/Minus Query 14305 GAATGGAGTGCTTGAAAGTGACATT-GGTGTTAAGTTCGACACCAGGAACTTCAAGCTGG 14363 ||| || || || ||||| ||| | || || ||||| |||||| | ||||||| |||| Sbjct 295 GAACGGGGTTCTGGAAAGCGACNGTCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGG 236 Query 14364 GATGGGATCCCGAAACCAAGTTGATCATGCC-TGGAGTGTATACGTATGAAGCCTTCCAT 14422 | | || || | || | ||||||| | |||| ||||| | |||||||||||| Sbjct 235 GGTTTGACCCAGTCACTGGTCTTGTCATGCCCTAGAGTATATACAAACGAAGCCTTCCAT 176 Query 14423 CCTGACATTGTCTTACTGCCTGGCTGCGGAGTGGATTTTACCGAGAGTCGTTTGAGCAAC 14482 || ||||| | || ||||| | ||| ||||| || ||| | || || |||||||| Sbjct 175 CCAGACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAAC 116 Query 14483 CTTCTTGGTATCAGaaaaaaaCAGCCATTTCAAGAGGGTTTTAAGATTTTGTATGAAGAT 14542 | | || ||| | || || || || || ||||| |||| ||| || || || Sbjct 115 TTGTTGGGCATCCGCAAGCGGCAACCCTTCCAGGAGGGCTTTAGGATCACCTACGATGAC 56 Query 14543 TTAGAAGGTGGTAATATTCCGGCCCTCTTGGATGTAGATGCCTA 14586 | || |||||||| ||||| || || |||||||| || ||||| Sbjct 55 CTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTA 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110817170396800