Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq77 102 1e-16 >seq77 Length=1106213 Score = 102 bits (112), Expect = 1e-16 Identities = 102/131 (78%), Gaps = 6/131 (5%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGG---TGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCAC 115932 ||||| |||| |||| ||||| | ||||||||| | ||||| ||||| | | || Sbjct 1104944 AACTCCCCCGAGAGGACCCTGCGTGTG---TAGATGTTGCTGGTGTAGGGCTCGATGGAC 1104888 Query 115933 TCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTG 115992 |||||||| |||| ||| ||||| |||||||| ||||||||||| | ||||| |||||| Sbjct 1104887 TCATTGTTGCCCAGGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGAAATGAGGAGGCTG 1104828 Query 115993 TTGCGGAGACC 116003 || | || ||| Sbjct 1104827 TTCCTGACACC 1104817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611172805104000