Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq169466 91.5 4e-14 >seq169466 Length=306 Score = 91.5 bits (100), Expect = 4e-14 Identities = 183/268 (68%), Gaps = 8/268 (3%) Strand=Plus/Minus Query 17155 GTGCTGAAGAGCGACA-TCGGGGTGAAGTTCGACACCCGCTACCTGGACCTGCTCACCGA 17213 || ||| | |||||| ||||||| ||||| ||||||||| || | ||| || Sbjct 288 GTTCTGGAAAGCGACNGTCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGA 229 Query 17214 CCCGGTGACGGGCCTGGTGACGCCCGGCACGTACGTCTTCAAGGGT----TACCACCCGG 17269 ||| || || || || || | |||| | ||| | | ||| | | ||| || | Sbjct 228 CCCAGTCACTGGTCTTGTCATGCCCTAGA-GTA--TATACAAACGAAGCCTTCCATCCAG 172 Query 17270 ACGTGGTGCTGCTGCCGGGCTGCGCGGTGGACTTCACGTACAGCCGGCTGAGCCTGATGC 17329 || | | ||||||||| || |||||||||||| ||||||| |||||| || Sbjct 171 ACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGT 112 Query 17330 TGGGCATCGGCAAGCGGGAGCCGTACGCGAAGGGGTTCTGCCTTACCTACGAGGACCTGG 17389 |||||||| |||||||| | || | | | |||| || | | |||||||| ||||||| Sbjct 111 TGGGCATCCGCAAGCGGCAACCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGG 52 Query 17390 AGGGAGGCGACGTGCCGGCGCTGCTGGA 17417 |||| || || | || || ||| |||| Sbjct 51 AGGGTGGTAACATTCCCGCACTGTTGGA 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144675138300000