Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 7e-12 seq23 84.2 9e-11 >seq4 Length=50638526 Score = 87.8 bits (96), Expect = 7e-12 Identities = 164/240 (68%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 || |||||||| || || || ||||| || || || || || || | || || | Sbjct 6519120 GAGATTGTGCTGGTGGGTGGCTCTACCCGGATCCCCAAGATCCAGAAGCTGCTGCAGGAT 6519179 Query 451958 TATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGT 452017 | || || ||| |||| |||||| | || |||||||| ||||| || |||||| Sbjct 6519180 TTCTTCAATGGCAAAGAACTCAACAAGAGCATCAACCCTGATGAGGCTGTGGCTTATGGT 6519239 Query 452018 GCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGATATT 452074 ||||| || ||||||||||| || | || ||| | ||| || | ||| | Sbjct 6519240 GCTGCCGTACAAGCAGCTATCCTCATGGG---AGACAAGTCTGAGAATGTCCAGGATCTG 6519296 Query 452075 CTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 ||||| | ||||| || ||||| || || || | || |||||||| ||| |||||||| Sbjct 6519297 CTGTTGCTGGATGTCACCCCTCTGTCCCTGGGCATCGAGACAGCTGGAGGAGTGATGACT 6519356 >seq23 Length=11135842 Score = 84.2 bits (92), Expect = 9e-11 Identities = 83/107 (78%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| ||||||| || || | ||||| | || ||||| ||||||||| Sbjct 796426 AAAGCCAAGCCCCATATTCAGGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 796485 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| | ||||| || || || ||||| ||||||||||| Sbjct 796486 GAAGAAATTTCTGCAATGGTCCTGACGAAGATGAAGGAAACAGCAGA 796532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1968012851275200