Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_016895.2 Length=31806 Score E Sequences producing significant alignments: (Bits) Value seq169466 168 1e-37 >seq169466 Length=306 Score = 168 bits (186), Expect = 1e-37 Identities = 211/286 (74%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 13178 GCAGGCAGAAA-GGGGTGCGGGAGGAGGACA-TCGGGCTCAAGTTTGACACGCGGAACTT 13235 |||||||| || ||||| | ||| ||| ||||| | ||||||||||| || ||||| Sbjct 303 GCAGGCAGGAACGGGGTTCTGGAAAGCGACNGTCGGGGTAAAGTTTGACACCCGCAACTT 244 Query 13236 CCGCCTGGGCTTCGACCCCGAGACCCAGCTGGTCATGCCGGGGT-TCTACACCAACGAGG 13294 | | ||||| || ||||| | || || |||||||| | | || || ||||| | Sbjct 243 CAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCCTAGAGTATATACAAACGAAG 184 Query 13295 CCTTTCACCCGGACATAGTGCTGAGTCCGGGCTGCGCGGTGGACTTCACTCAGAGCCGGC 13354 |||| || || ||||| | || |||| || |||||||||||| || ||||| | Sbjct 183 CCTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACAGCCGCC 124 Query 13355 TGAACAACTTTTTGGGCATCAGAAAGAGGCAACCCTACCAGGAGGGCTTCATTATATCCT 13414 ||| |||||| ||||||||| | ||| ||||||||| |||||||||||| | || ||| Sbjct 123 TGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTCCAGGAGGGCTTTAGGATCACCT 64 Query 13415 GGGACGACCTGCAGGGGGGCAACATCCCCGCGCTGCTGGACTTGGA 13460 || |||||| |||| || ||||| ||||| ||| |||| |||| Sbjct 63 ACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101290133190400