Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq77 100 5e-16 >seq77 Length=1106213 Score = 100 bits (110), Expect = 5e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789 |||||||||||||| |||| |||| | ||||| || || ||||||||||| ||||||| Sbjct 1101094 CCACCTCGTCCTTGCTGGTGTACTCCACAATCTCAGTGCACAGGTTGCTGCATTTGATGG 1101035 Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849 | ||||||| | || || ||| | ||| || ||||||||||||||| |||| Sbjct 1101034 TGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGAGTCCTTGTAGAGCATGTAGGGGG 1100975 Query 221850 CGCCAGTCTC 221859 ||||||||| Sbjct 1100974 TGCCAGTCTC 1100965 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || |||| || || | || |||||| || || || ||||| || || || || || Sbjct 1099975 CTGGTTGGTTTCCACTCGCTTCATGAAAAGATCAGGAATCCAGAGAGCAAAGAACAGGTC 1099916 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 |||| |||||||| || || |||| ||| ||| |||| |||||||| ||||| Sbjct 1099915 CCTGGCTCGCTGCTCTTCTTTACCTGTGTTCTTCTTCAAGTCCAGGAACTCAAAGATGTC 1099856 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||||||||||||| |||| ||| | ||| || |||| || Sbjct 1099855 CAAGTGCCACGGCTCCAGGTAGATGGCAAAAGCCCCAGGTCTCT 1099812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925310545536000