Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4 333 3e-86 seq29 188 9e-43 seq19 187 3e-42 seq204287 161 1e-34 seq23300 161 1e-34 seq110 102 1e-16 seq69 91.5 2e-13 seq23 87.8 2e-12 >seq4 Length=50638526 Score = 333 bits (368), Expect = 3e-86 Identities = 1043/1594 (65%), Gaps = 31/1594 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || ||||| | || | | Sbjct 6518133 GCGATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCACGGCAAG 6518192 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || || || || ||||| || || || || || || || || Sbjct 6518193 GTGGAGATCATCGCCAACGATCAGGGCAACCGCACCACACCCAGCTATGTGGCGTTCACC 6518252 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || ||| ||| |||||||| | ||| Sbjct 6518253 GATACGGAGCGGCTCATCGGGGATGCTGCCAAGAACCAGGTAGCAATGAACCCCACCAAC 6518312 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || | ||||| || || || || || || ||||||| | || | ||| || Sbjct 6518313 ACCATTTTTGATGCCAAACGCCTCATCGGCCGCAAGTATGACGACCCCACAGTGCAGTCA 6518372 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| ||| || || || || | ||||| | | | | Sbjct 6518373 GACATGAAGCACTGGCCTTTCCGTGTGGTGAA---TGAGGGAGGCAAGCCCAAGGTGCAG 6518429 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTGTT 195657 || || | | || |||| ||| | || |||| || || || || |||||| | Sbjct 6518430 GTGGAGTACAAGGGGGAGATGAAG-ACCTTCTTCCCAGAGGAGATCAGCTCCATGGTGCT 6518488 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTT-TCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 | ||||||||||||| ||| || | | || |||| || ||| || |||| || Sbjct 6518489 CACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGTGCAAG-GTGCAAAATGCTGTCA 6518547 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || || || ||||||| |||||| || || ||||| || |||||||||| | | Sbjct 6518548 TCACAGTGCCAGCGTACTTCAATGATTCCCAGCGCCAGGCCACCAAGGACGCTGGCACCA 6518607 Query 195777 TTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 | | || || || ||| | | || |||||||| || || || || || || ||||| Sbjct 6518608 TCACAGGCCTCAA-TGTGATGCGTATCATCAATGAGCCCACTGCAGCCGCTATCGCTTAC 6518666 Query 195836 GGTCTGGACAAGAAC--AA----GGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || ||||||||||| || || | ||| || || || | |||||||| | || Sbjct 6518667 GGCCTGGACAAGAAAGGAACCCGGGCTGGAGAGAAGAACGTGCTCATCTTTGACTTGGGA 6518726 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 || || || || |||||||| | || | || || | ||| || || || |||||| | Sbjct 6518727 GGGGGCACTTTCGATGTCTCCATCCTTACCATCGAGGATGGGATTTTTGAGGTAAAGTCC 6518786 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTT 196008 || |||||||| || ||| | ||||| || || || || || | | || ||| Sbjct 6518787 ACAGCTGGTGACACCCATTTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCACTTT 6518846 Query 196009 GTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 || || || ||| || ||| | ||| || ||| |||| || | || | | Sbjct 6518847 GTG-GAAGAATTCAAGCGCAAGCACAAGCGTGACATTGCTGGCAACAAACGAGCGGTGAG 6518905 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 ||||| | ||||| ||||| | || || || || ||| || | | || | | Sbjct 6518906 GCGGCTGCGCACTGCTTGTGAGAGGGCAAAGCGCACCCTCAGCTCCTCCACACAGGCCAG 6518965 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACG 196188 |||||||||| || ||||||| || ||||||||||| || | ||||| ||||| || Sbjct 6518966 CATTGAGATTGACTCTCTGTTTGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCG 6519025 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 |||||| ||| | || |||| | || | |||| || || || | | || Sbjct 6519026 TTTTGAGGAGCTCAATGCTGACCTTTTCCGTGGCACCCTGGAGCCGGTGGAGAAGGCTCT 6519085 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 ||||| || ||| | || ||| || | | || ||||| || ||||| || || || Sbjct 6519086 GCGTGATGCTAAGCTCGACAAGGGCCAGATCCAGGAGATTGTGCTGGTGGGTGGCTCTAC 6519145 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368 ||| || || ||||| || || |||| ||||||||| ||||| | ||||| Sbjct 6519146 CCGGATCCCCAAGATCCAGAAGCTGCTGCAGGATTTCTTCAATGGCAAAGAACTCAACAA 6519205 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | |||||||| ||||| || || ||||||||||| ||||| || || ||||| ||| Sbjct 6519206 GAGCATCAACCCTGATGAGGCTGTGGCTTATGGTGCTGCCGTACAAGCAGCTAT--CCTC 6519263 Query 196429 AGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 | | | ||||| | | || ||||| ||||| ||| | || ||||| | || | || Sbjct 6519264 ATG-GGAGACAAGTCTGAGAATGTCCAGGATCTGCTGTTGCTGGATGTCACCCCTCTGTC 6519322 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 |||||| | || ||||| || || || |||||| | || | | ||||| || || Sbjct 6519323 CCTGGGCATCGAGACAGCTGGAGGAGTGATGACTGCTCTCATCAAGCGCAACACCACCAT 6519382 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCATA 196604 || || || | || ||| | || || || || || || | || | || | Sbjct 6519383 CCCCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCTGG 6519441 Query 196605 TTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTT 196661 | || || ||||| | |||| ||| || ||| ||||||| | | || || | | Sbjct 6519442 TCCAGGTGTATGAGGGTGAGAGAGCT---ATGACAAGGGATAACAACTTGCTGGGCAAGT 6519498 Query 196662 TCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCG 196721 | || | || || || || | |||||||| || || || ||||| | || || | Sbjct 6519499 TTGACCTAACAGGCATCCCCCCAGCACCCAGGGGAGTCCCCCAGATCGAGGTCACTTTTG 6519558 Query 196722 ATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTG 196781 | || || || ||||| || || ||||||| |||| ||||||| | || || Sbjct 6519559 ACATCGATGCCAATGGTATCCTGAACGTCAGTGCTGTGGACAAGAGCACGGGTAAGGAGA 6519618 Query 196782 AAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGG 196841 | ||||| || |||||||||||||| || || |||||| || ||||| ||||||| Sbjct 6519619 ACAAGATCACCATCACCAATGACAAGGGTCGCCTCAGTAAGGACGACATTGACCGTATGG 6519678 Query 196842 TTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 | ||||| || || ||||||| | ||| || || Sbjct 6519679 TGCAAGAAGCAGAGAAGTACAAAGCAGAGGATGA 6519712 >seq29 Length=9066916 Score = 188 bits (208), Expect = 9e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| |||||||| ||||||||||| ||||| ||| | Sbjct 5719626 ATGCAGATCTTTGTGAAGACCCTGACTGGAAAGACTATCACCCTTGAGGTGGAGCCCAGT 5719685 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || ||||| |||||||| || |||||| Sbjct 5719686 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 5719745 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | | || || ||||| || ||||| |||||||| ||||| ||| |||| |||||| Sbjct 5719746 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTCTCTGACTACAAC 5719805 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || || ||||| ||||| |||||||| || | || ||||||| Sbjct 5719806 ATCCAGAAAGAGTCAACTCTGCACCTTGTCCTGCGCCTCAGGGGTGG 5719852 Score = 167 bits (184), Expect = 3e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| ||||||||| | Sbjct 5719854 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 5719913 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || ||||| |||||||| || || ||| Sbjct 5719914 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 5719973 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| || ||||| || ||||| | ||||||||| Sbjct 5719974 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGGCGCACCCTGTCAGATTACAAC 5720033 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||||| || || Sbjct 5720034 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 5720065 >seq19 Length=13664266 Score = 187 bits (206), Expect = 3e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| |||||||| || ||||| ||||| || || ||||| || || || || Sbjct 12085329 GTGGTATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACTCTGGAAGTCGAAC 12085270 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || || || ||||||||||||| ||||| ||||||||||| || || | Sbjct 12085269 CCAGTGACACCATTGAGAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTG 12085210 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| | || || |||||||| || ||||| |||||||| || |||||| |||| | Sbjct 12085209 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACT 12085150 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| | || |||||||| ||||| |||||||| || | || ||||||||| Sbjct 12085149 ACAATATCCAGAAGGAGTCAACTCTGCACCTTGTCCTGCGCCTGCGGGGTGGT 12085097 Score = 168 bits (186), Expect = 9e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||| | ||||| || || |||||||| ||||| ||| | Sbjct 12085552 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 12085493 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| ||||||||||| || || || ||| Sbjct 12085492 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 12085433 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| || ||||| ||||||||| |||| |||||| Sbjct 12085432 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAAC 12085373 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || || || || || || || | || ||||||||| Sbjct 12085372 ATCCAGAAGGAATCCACACTGCATCTCGTGCTGCGCCTGCGGGGTGGT 12085325 >seq204287 Length=600 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || ||||||||||| || || ||| | Sbjct 291 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTGGAAGTCGAGCCCAGT 232 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || |||||||| || || ||||| ||| Sbjct 231 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCCGACCAG 172 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| || ||||| |||||||| | ||||||||| Sbjct 171 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACCCTGTCAGATTACAAC 112 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||||| || || Sbjct 111 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 80 >seq23300 Length=271 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| || || ||| | Sbjct 7 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTCGAGCCCAGT 66 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || ||||| |||||||| ||||| ||| Sbjct 67 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 126 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| |||||||| | ||||||||| Sbjct 127 CAGAGGCTGATCTTTGCAGGGAAGCAGCTGGAAGATGGTCGTACCCTGTCAGATTACAAC 186 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||||| || || Sbjct 187 ATCCAGAAGGAATCCACCCTGCACCTGGTGCT 218 >seq110 Length=666948 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || ||||| |||||||||||||| ||| | Sbjct 229146 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAAACCATCACCCTCGAGGTGGAGCCCAAT 229087 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| | ||||||||||| || ||||||||||| Sbjct 229086 GACACCATCGAGAACGTGAAAGCCAAGATCCAGGATAAGGAAGG 229043 >seq69 Length=2245672 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || |||||||| || || || |||| || || || || ||||| || || || ||| Sbjct 684109 GCTGTGGTGACTGTCCCAGCCTATTTCAACGACTCCCAGCGCCAGGCCACCAAAGATGCT 684168 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | ||||| || || ||| || ||||| ||||| || || ||||| ||||| ||| Sbjct 684169 GGAACCATTGCAGGGCTCAACGTGCTGAGAATCATCAACGAGCCCACAGCAGCTGCCATT 684228 Query 195830 GCTTATGGTCTGGACAAGAA 195849 || || || ||||||||||| Sbjct 684229 GCCTACGGGCTGGACAAGAA 684248 >seq23 Length=11135842 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 |||||| ||||| ||||||||||| ||||||||| | || | ||| || || | | Sbjct 796994 AACAGCTGCTGCCATTGCTTATGGACTGGACAAG---AGAGAGGGAGAGAAGAACATCCT 797050 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | || || || || ||||| || |||||||| || || |||| ||||| || | Sbjct 797051 TGTATTCGACCTGGGCGGTGGAACTTTTGATGTGTCCCTCCTCACAATTGACAACGGAGT 797110 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| ||||||| ||| || ||||| || ||||| ||||| || || Sbjct 797111 CTTTGAAGTTGTGGCTACTAATGGAGACACTCACCTGGGTGGAGAAGACTTTGA 797164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655359233568000