Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq239384 91.5 4e-13 >seq239384 Length=821 Score = 91.5 bits (100), Expect = 4e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 302621 TTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTT 302680 |||| || || || || || || || | || || ||||| || |||||||| | ||| Sbjct 821 TTTTGACGGCCGTGTCGATGAGGCCCTCGCGGCCGCCCATGGCGTGGAAGAAGAACTCGG 762 Query 302681 CCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 || ||| || || | | ||||| |||| ||||| || || |||||| | | Sbjct 761 TGGG-CGTCAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTAG 703 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| |||| || || ||||| | ||||| ||||| || Sbjct 702 TCGTCCTTGATGAAGTGCGGCAGCGTCCGGTGCTTGAAGCCGAACGGGATCCGCTTGCCC 643 Query 302800 TCAACGTTCTGCTGTCCCA 302818 || |||||||||||||||| Sbjct 642 TCCACGTTCTGCTGTCCCA 624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1466077327382800