Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=67421796 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||||||||| || | || |||||||||||| | |||||| || ||| | |||| Sbjct 54271322 AGCATTTGGGGACCAACGTGTGATGGCTTAGATCGGATTGTTGAGAGGTTCAATATGCCT 54271263 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||||| ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 54271262 GAGCTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 54271204 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 |||| || || || || |||| | |||| || || ||||| || ||| Sbjct 54271203 AGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACATTATGTGATGTCA 54271152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461781808992000