Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_024474.1 Length=45480 Score E Sequences producing significant alignments: (Bits) Value seq169466 87.8 5e-13 >seq169466 Length=306 Score = 87.8 bits (96), Expect = 5e-13 Identities = 120/166 (72%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 18529 CTTTCACCCGGACATCATTTTATTGCCCGGGTGCGCCGTGGACTTTACGTACAGCCGCCT 18588 ||| || || ||||||||||| |||| | || |||||||| || |||||||||| Sbjct 182 CTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACAGCCGCCT 123 Query 18589 CAGCCTTATCTTGGGCATCGGCAAACGCGAACCCTACTCCA--AGGGTTTCACGATTACG 18646 ||| | ||||||||| |||| || |||||| |||| |||| || | ||| || Sbjct 122 GAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCT--TCCAGGAGGGCTTTAGGATCACC 65 Query 18647 TACGAGGACTTGGAGGGCGGCCAAGTGCCCGCCCTGCTCGACGTGG 18692 ||||| ||| ||||||| || | | ||||| ||| | || |||| Sbjct 64 TACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGG 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144888763297600