Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq171425 152 1e-32 >seq171425 Length=537 Score = 152 bits (168), Expect = 1e-32 Identities = 266/379 (70%), Gaps = 15/379 (4%) Strand=Plus/Plus Query 6300 CTCCTCTTAGGCGTTCGTTGGTCCAACACAGTCTTCCACCTTTTTTGGAGCAAAATGGGG 6359 |||| | |||||| ||||||||||| || || | || || || ||||| ||||| | Sbjct 8 CTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCG 67 Query 6360 GAAGCACGTCTAGGAGTGTTTCATCTGGGGGATCGGCATCAATTGTAAAGATCCCCGGTA 6419 | || |||||| | || || || ||||| || || || | ||||||| ||| || | Sbjct 68 GTAGGG-GTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCA 126 Query 6420 AAAGTGAGGAGTCGAAATATGATATCTT------TTGAAAATTATTTAAAGTTTGTTGCC 6473 || | |||||| || |||||| ||| || | || | || |||| Sbjct 127 GCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCAAGTC---TAGCGCCTGCTGCC 183 Query 6474 ACTTGTGGGCCGCCAGCGCTCTTTCAAACGGATTAAg-ggggggTCCCCAAGGCATGGGG 6532 | | |||| || ||||| | || | || || || |||||| ||||| ||||||||| Sbjct 184 ATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGGGG 243 Query 6533 -TGGGTAAGTGCAGAAGCGTACATTCCGCAAA-TGTCATACACGTAGAGAGGT-TCGTTG 6589 ||||| || || || |||||||| ||||||| |||| || |||||||| || || || Sbjct 244 GTGGGTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTCTCTG 303 Query 6590 AGGATGCCAATATAGGTGGGATAGCATCTTCCTCCGCGGATGCTGTTTCTTACATAGTCA 6649 || || |||| ||| || || ||||||||||| |||||||||||| | || || || Sbjct 304 AGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTAATCG 363 Query 6650 TAAAGTTCATG-GGAGGGG 6667 || ||||| || |||||| Sbjct 364 TATAGTTCGTGCCGAGGGG 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104016243234400