Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq77 91.5 1e-13 seq204287 87.8 2e-12 >seq77 Length=1106213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562 |||||| ||| || || | |||||||||||||||||| ||| |||| || ||||| | Sbjct 1101076 TGTACTCCACAATCTCAGTGCACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGT 1101017 Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615 |||| |||| ||||| | ||| ||| |||||||||| || ||| |||||| Sbjct 1101016 TGCTCTTCCTGTTGCAAGAGTCCTTGTAGAGCATGTAGGGGGTGCCAGTCTCG 1100964 >seq204287 Length=600 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||||||||| || ||||||||||| || ||| ||| |||||| ||||| || || | Sbjct 324 TTGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAG 383 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| || | ||| || || ||||| || ||||| || || || || |||| Sbjct 384 CGAAGATCAGCCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCA 443 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || || | ||||| || || | || | || || |||||||| |||| Sbjct 444 CATTCTCGATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTTT 503 Query 132108 TTATGAAAATCTGCAT 132123 ||| ||| |||||||| Sbjct 504 TTACGAAGATCTGCAT 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474797694384000