Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq27280 197 2e-44 seq7 197 2e-44 seq47252 170 3e-36 seq271094 161 1e-33 seq77 114 2e-19 seq2 98.7 1e-14 seq72904 87.8 3e-11 >seq27280 Length=766 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 253 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 200 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 199 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCCCGC 140 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 139 CTGGCGCACTACAACAAGCGCTCCACTATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 80 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 79 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 31 >seq7 Length=42072568 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7050255 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7050308 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 7050309 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCCCGC 7050368 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7050369 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7050428 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7050429 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7050477 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| ||||||||||||||| || || |||| ||| |||| ||||| Sbjct 7122368 TACAAAGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCATG 7122315 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 7122314 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 7122255 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7122254 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7122195 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7122194 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7122146 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7059704 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7059757 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 7059758 GGCATCATGAATTCTTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 7059817 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7059818 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7059877 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7059878 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7059926 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7063765 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7063712 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 7063711 GGCATCATGAATTCTTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCGCGC 7063652 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7063651 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7063592 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7063591 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7063543 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7146402 TACAAAGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7146455 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| ||| Sbjct 7146456 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCCCGC 7146515 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7146516 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7146575 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7146576 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7146624 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7157411 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7157358 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| ||||||| || Sbjct 7157357 AGTATCATGAATTCTTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCCCGG 7157298 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7157297 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7157238 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7157237 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7157189 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 7161201 TACAAAGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 7161254 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||||| || Sbjct 7161255 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCCTCCCGG 7161314 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| |||| ||||||||||| ||||||||| Sbjct 7161315 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 7161374 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 7161375 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 7161423 Score = 161 bits (178), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| || || || || |||| ||| |||| ||| Sbjct 30474312 TCTACAAGGTGCTGAAGCAGGTCCATCCTGACAC-----GGGCATC-TCCTCCAAGGCCA 30474365 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||| ||||| | || ||||| | || ||| | Sbjct 30474366 TGGGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATTGCTGGGGAAGCCTCCC 30474425 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||||| Sbjct 30474426 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGC 30474485 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 30474486 GCCTGCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 30474536 >seq47252 Length=888 Score = 170 bits (188), Expect = 3e-36 Identities = 145/179 (81%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| ||||||||||| || |||||||||| |||| ||||||| ||| Sbjct 861 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACACCTTCGAGCGCATCGCGGGCGA 802 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 |||| |||||||||| || |||||||||| ||| ||| |||| ||||||||||| Sbjct 801 GGCCTCCCGCCTGGCGCACTACAACAAGCGCTCCACTATCACGTCGCGGGAGATCCAGAC 742 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 741 GGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 683 >seq271094 Length=691 Score = 161 bits (178), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| || || || || |||| ||| |||| ||| Sbjct 437 TCTACAAGGTGCTGAAGCAGGTCCATCCTGACAC-----GGGCATC-TCCTCCAAGGCCA 384 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||| ||||| | || ||||| | || ||| | Sbjct 383 TGGGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATTGCTGGGGAAGCCTCCC 324 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | | || ||||||||||| ||||||| Sbjct 323 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGC 264 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 263 GCCTGCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 213 >seq77 Length=1106213 Score = 114 bits (126), Expect = 2e-19 Identities = 110/139 (79%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| ||||| ||| | |||| | |||||| ||||| ||||||||| ||||| Sbjct 1100932 CAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAGACTGGCACCCCCTACATGCTCTAC 1100991 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CA 262208 |||||| | |||| || ||||||||||||||||||||||||| || | || || Sbjct 1100992 AAGGACTCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCA--TCAAATGCAGCA 1101049 Query 262209 ACCTGTGCACCGAGATCGT 262227 |||||||||| ||||| || Sbjct 1101050 ACCTGTGCACTGAGATTGT 1101068 >seq2 Length=67421796 Score = 98.7 bits (108), Expect = 1e-14 Identities = 91/114 (80%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||||||| || ||||| ||| || ||| | |||||||||| ||||| Sbjct 53983480 GAGCCGCTGCTGCGGGAGAACCCCCGCCGGTTCGTCATCTTCCCCATCCAGTACCACGAC 53983539 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| ||||||||||||||||| ||||| || |||||||| Sbjct 53983540 ATCTGGCAGATGTA-CAAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGT 53983592 >seq72904 Length=680 Score = 87.8 bits (96), Expect = 3e-11 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 1818123 GGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTA 1818182 ||||||||||||| ||| ||| | | | ||||||||| ||||||| | ||| || | Sbjct 85 GGCACGCCCACCTGGTCGATGGCCAGGTTGGGGTCGGGCGTGATGACCGTGCGGGCAGAG 144 Query 1818183 AAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGC 1818242 |||| ||||| ||||||||| ||||| || | || |||||||| ||||| | |||| Sbjct 145 AAGTCCACGCGTTTGCCCATGAGGTTGCCCCGAACCCGACCCTCCTTCCCCTTCAGCCGC 204 Query 1818243 T 1818243 | Sbjct 205 T 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7148451260512800