Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_027705.1 Length=33090 Score E Sequences producing significant alignments: (Bits) Value seq169466 102 2e-17 >seq169466 Length=306 Score = 102 bits (112), Expect = 2e-17 Identities = 174/251 (69%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 15892 TCGGGGTAAAGATAGACACTAGAAACTTTAGATTAGGTTTTGACCCCGTGAGTGAACTAG 15951 ||||||||||| | ||||| | ||||| ||| | || |||||||| || | || || | Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTG 212 Query 15952 TGATGCCGG-GTCTTTACACATATGAGGCTTTTCATCCGGATGTGGTACTACTCCCAGGC 16010 | ||||| | | || ||| | || || || ||||| || | | | || || | Sbjct 211 TCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGAT 152 Query 16011 TGTGCCATTGATTTCACGTACACCCGCCTAAACAACCTCCTCGGCATCCGCAAGCGGCAG 16070 | | || ||||| ||| |||||| | |||| | | ||||||||||||||||| Sbjct 151 CCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAA 92 Query 16071 CCGTTCCAACAAGGCTTTGTCATCTCGTACGAGGATCTCAAGGGGGGTAACATTCCTGCC 16130 || ||||| | |||||| ||| | ||||| || || |||| ||||||||||| || Sbjct 91 CCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCA 32 Query 16131 TTGCTGGACGT 16141 || |||| || Sbjct 31 CTGTTGGATGT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105384080905600