Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_027708.1 Length=31848 Score E Sequences producing significant alignments: (Bits) Value seq169466 109 1e-19 >seq169466 Length=306 Score = 109 bits (120), Expect = 1e-19 Identities = 170/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 13195 AAGTTTGACACTAGGAATTTCAGACTGGGCTATGACCCAGAAACACAGCTGGTCATGCC- 13253 ||||||||||| | || ||||||||||| | |||||||| || || |||||||| Sbjct 263 AAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCC 204 Query 13254 -AGGGTTCTATACCAATGAGGCTTTTCACCCCGACATTATCTTGAGCCCCGGTTGCGCCA 13312 || | | ||||| || || || || || || ||||| || ||| || | | || Sbjct 203 TAGAG-TATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGG 145 Query 13313 TAGACTTTACCAATACCAGATTGAACAACTTTTTGGGGATCAGGAAAAGACAACCTTTCC 13372 | ||||| ||| | | | | ||| |||||| ||||| ||| | || | ||||| |||| Sbjct 144 TGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTCC 85 Query 13373 AGGAAGGGTTTATTATTGCCTATGAAGACTTAAAAGGGGGCAACATTCCGGCTCTTTTGG 13432 |||| || |||| || |||| || ||| | | || || |||||||| || || |||| Sbjct 84 AGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGG 25 Query 13433 A 13433 | Sbjct 24 A 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101424047368000