Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_029898.1 Length=37545 Score E Sequences producing significant alignments: (Bits) Value seq169466 150 4e-32 seq171425 122 2e-23 >seq169466 Length=306 Score = 150 bits (166), Expect = 4e-32 Identities = 190/260 (73%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 13851 TCGGGGTAAAGTTCGACACGCGCAACTTTCGGTTGGGCTTTGACCCCGTGGCCAACCTGG 13910 ||||||||||||| ||||| |||||||| | |||| |||||||| || | || | Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTG 212 Query 13911 TGATGCCGGGGAAG-TATACCTACGAGGGCTTTCACCCGGACATCGTGCTGCTGCCCGGT 13969 | ||||| || ||||| |||| | ||| || || |||||| | ||||||| | | Sbjct 211 TCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGAT 152 Query 13970 TGCGCGGTGGACTTTACTTATTCCCGCTTAAATAACCTGCTGGGCATTCGTAAGCGGTGG 14029 || ||||||||| || | |||| | | ||| || ||||||| || |||||| Sbjct 151 CCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAA 92 Query 14030 CCCTATCAGGAAGGGTTCATCATCAGCTACGATGACCTGCTGGGCGGCAACATTCCCGGG 14089 |||| ||||| || || | |||| ||||||||||||| ||| || |||||||||| Sbjct 91 CCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCA 32 Query 14090 CTCTTGGATGTGGAGGCCTA 14109 || ||||||||||| ||||| Sbjct 31 CTGTTGGATGTGGACGCCTA 12 >seq171425 Length=537 Score = 122 bits (134), Expect = 2e-23 Identities = 254/369 (69%), Gaps = 16/369 (4%) Strand=Plus/Plus Query 6386 CTCCACGCAGGCGCTCGTTGGTCCAAGCCAGACGCCCACCTTTGCGAGAGCAGAAAGGGG 6445 |||| || ||||||||||||||||| || || || || ||||| |||||||| || | Sbjct 8 CTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCG 67 Query 6446 GGAGGACATCCAGGTA-GTCTTCGGGGGGCGGGTCGGCATCGATGGTGAAGATGCCGGGT 6504 | ||| || || | |||| || || ||||| || || | ||| |||| ||||| Sbjct 68 GTAGGGG-TCTAGCTGCGTCT-CGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGC 125 Query 6505 AGGAGGGTGGTGTTAAAGTAGGAGATGGAGGCGGGGTCTTGCAAG-----CGC-TGCTCC 6558 || ||| | || |||||| || | |||||||| ||| |||| | Sbjct 126 AGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATC---CTTGCAAGTCTAGCGCCTGCTGC 182 Query 6559 CAGGCGCGCATGGCGAGGGCCCGATCGAAGGGGTGCAGGGGGCGCCCGGCGGGGAA--GG 6616 || ||||| ||| || || || ||| | |||| || ||| | | | || | || Sbjct 183 CATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGGG 242 Query 6617 GGTGGGTGAGGGCGCTGGCATACATGCCACAGA-TGTCGTAGACGTAGATGGGTTCCTCC 6675 |||||||||| ||| ||| |||||||| || | ||||||| ||||||| ||| ||| Sbjct 243 GGTGGGTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTCTCT 302 Query 6676 -AGGACCCCCAGGTAAGAGGGGTAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTC 6734 || | || || || | ||||| || | || |||||||||||||| |||||||| || Sbjct 303 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTAATC 362 Query 6735 GTAGAGCTC 6743 ||| || || Sbjct 363 GTATAGTTC 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119588549029600