Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_029899.1 Length=37556 Score E Sequences producing significant alignments: (Bits) Value seq169466 150 4e-32 seq171425 125 2e-24 >seq169466 Length=306 Score = 150 bits (166), Expect = 4e-32 Identities = 190/260 (73%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 13847 TCGGGGTAAAGTTCGACACGCGCAACTTTCGGTTGGGCTTTGACCCCGTGGCCAACCTGG 13906 ||||||||||||| ||||| |||||||| | |||| |||||||| || | || | Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTG 212 Query 13907 TGATGCCGGGGAAG-TATACCTACGAGGGCTTTCACCCGGACATCGTGCTGCTGCCCGGT 13965 | ||||| || ||||| |||| | ||| || || |||||| | ||||||| | | Sbjct 211 TCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGAT 152 Query 13966 TGCGCGGTGGACTTTACTTATTCCCGCTTAAATAACCTGCTGGGCATTCGTAAGCGGTGG 14025 || ||||||||| || | |||| | | ||| || ||||||| || |||||| Sbjct 151 CCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAA 92 Query 14026 CCCTATCAGGAAGGGTTCATCATCAGCTACGATGACCTGCTGGGGGGCAACATTCCCGGG 14085 |||| ||||| || || | |||| ||||||||||||| ||| || |||||||||| Sbjct 91 CCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCA 32 Query 14086 CTCTTGGATGTGGAGGCCTA 14105 || ||||||||||| ||||| Sbjct 31 CTGTTGGATGTGGACGCCTA 12 >seq171425 Length=537 Score = 125 bits (138), Expect = 2e-24 Identities = 255/369 (69%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 6388 CCACGCAGGCGCTCGTTGGTCCAAGCCAGACGCCCACCTTTGCGAGAGCAGAAAGGGGGG 6447 || || ||||||||||||||||| || || || || ||||| |||||||| || || Sbjct 10 CCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCGGT 69 Query 6448 AGGACATCCAGGT-AGTCTTCGGGGGGCGGGTCGGCATCGATGGTAAAGATGCCGGGTAG 6506 ||| || || | ||| ||| || ||||| || || | |||||||| ||||| || Sbjct 70 AGG-GGTCTAGCTGCGTC-TCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCAG 127 Query 6507 GAGGGTGGTGTTAAAGTAG--GAGATGGCGGCGGGGTCTTGCA-----AGCG-CTGCTCC 6558 ||| | || |||||| | | || | |||||| |||| ||||| | Sbjct 128 CAGGCGCGCGTCGAAGTAGTCTATCTTGCATC-----CTTGCAAGTCTAGCGCCTGCTGC 182 Query 6559 CAGGCGCGCATGGCGAGGGCCCGATCGAAGGGGTGCA--GGGGGCGCCCGGCGGGGAAGG 6616 || ||||| ||| || || || ||| | |||| | ||||| ||| || || Sbjct 183 CATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGGG 242 Query 6617 GGTGGGTGAGGGCGCTGGCATACATGCCAC-AGATGTCGTAGACGTAGATGGGTTCCTC- 6674 |||||||||| ||| ||| |||||||| | | |||||||| ||||||| ||| ||| Sbjct 243 GGTGGGTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTCTCT 302 Query 6675 CAGGACCCCCAGGTAAGAGGGGTAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTC 6734 || | || || || | ||||| || | || |||||||||||||| |||||||| || Sbjct 303 GAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTAATC 362 Query 6735 GTAGAGCTC 6743 ||| || || Sbjct 363 GTATAGTTC 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119623621790400