Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_029902.1 Length=38073 Score E Sequences producing significant alignments: (Bits) Value seq169466 154 4e-33 seq171425 114 3e-21 >seq169466 Length=306 Score = 154 bits (170), Expect = 4e-33 Identities = 191/260 (73%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 13853 TCGGGGTAAAGTTCGACACGCGCAACTTTCGGTTGGGCTTTGATCCCGTGACCAACCTGG 13912 ||||||||||||| ||||| |||||||| | |||| ||||| || || || || | Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTG 212 Query 13913 TGATGCCGGGGAAG-TATACCTACGAGGGCTTTCACCCGGACATCGTGCTGCTGCCCGGT 13971 | ||||| || ||||| |||| | ||| || || |||||| | ||||||| | | Sbjct 211 TCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGAT 152 Query 13972 TGCGCGGTGGACTTTACTTATTCCCGCTTAAATAACCTGCTGGGCATTCGTAAGCGGTGG 14031 || ||||||||| || | |||| | | ||| || ||||||| || |||||| Sbjct 151 CCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAA 92 Query 14032 CCCTACCAGGAAGGGTTCATCATCAGCTACGATGACCTGCTGGGCGGCAACATTCCCGGG 14091 |||| |||||| || || | |||| ||||||||||||| ||| || |||||||||| Sbjct 91 CCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCA 32 Query 14092 CTCTTGGATGTGGAGGCCTA 14111 || ||||||||||| ||||| Sbjct 31 CTGTTGGATGTGGACGCCTA 12 >seq171425 Length=537 Score = 114 bits (126), Expect = 3e-21 Identities = 255/372 (69%), Gaps = 22/372 (6%) Strand=Plus/Plus Query 6389 CTCCACGCAGGCGCTCGTTGGTCCAAGCCAGACGCCCACCTTTGCGAGAGCAGAAAGGGG 6448 |||| || ||||||||||||||||| || || || || ||||| |||||||| || | Sbjct 8 CTCCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCG 67 Query 6449 GGAGGACATCCAGGTA-GTCTTCGGGGGGCGGGTCGGCATCGATGGTGAAGATGCCGGGT 6507 | ||| || || | |||| || || ||||| || || | ||| |||| ||||| Sbjct 68 GTAGGGG-TCTAGCTGCGTCT-CGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGC 125 Query 6508 AGGAGGGTGGTGTTAAAGTAGGAGATGGAGGCGGGGTCTTGCAAG-----CGC-TGCTCC 6561 || ||| | || |||||| || | |||||||| ||| |||| | Sbjct 126 AGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATC---CTTGCAAGTCTAGCGCCTGCTGC 182 Query 6562 CAGGCGCGCATGGCGAGGGCCCGATCGAAGGGGTGCAGGGGGCG---CCC--GGCGGGGA 6616 || ||||| ||| || || || ||| | |||| || ||| | ||| ||| || Sbjct 183 CATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGG- 241 Query 6617 AAGGGTGGGTGAGGGCGCTGGCATACATGCCACAGA-TGTCGTAGACGTATATGGGTTCC 6675 ||||||||||| ||| ||| |||||||| || | ||||||| ||||| | ||| | Sbjct 242 --GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTC 299 Query 6676 TCC-AGGACCCCCAGGTAAGAGGGGTAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTA 6734 || || | || || || | ||||| || | || |||||||||||||| |||||||| Sbjct 300 TCTGAGTATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTA 359 Query 6735 GTCGTAGAGCTC 6746 ||||| || || Sbjct 360 ATCGTATAGTTC 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121272041548000