Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq171425 224 2e-54 seq169466 100 6e-17 >seq171425 Length=537 Score = 224 bits (248), Expect = 2e-54 Identities = 289/388 (74%), Gaps = 17/388 (4%) Strand=Plus/Plus Query 6104 CCGCGCAGCGGCTCGTTGGTCCAGCACAGGCGCCCGCCCTTGCGCGAGCAAAATGGGGGC 6163 ||||| || |||||||||||||||| ||||| ||||||||||||||||| ||||| || Sbjct 10 CCGCGTAGGCGCTCGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAATGGCGGT 69 Query 6164 AGGACGTCTAGCATCTCGTCGTCCGGAGGGTCGGCGTCGATGGTGAAGACCGCGGGCAGG 6223 ||| ||||||| | |||||||| ||||| ||||| | ||| |||||| ||||||| Sbjct 70 AGGG-GTCTAGCTGCGTCTCGTCCGGGGGGTCTGCGTCCACGGTAAAGACCCCGGGCAGC 128 Query 6224 AGGTCTGGGTCGAAGTACCCGAGAGGCCCTCCGGCTTTCA--TCTTGCGTTCGTAGAC-- 6279 ||| | ||||||||| | | | ||| || || ||| ||| | | | Sbjct 129 AGGCGCGCGTCGAAGTAGTCTATCTTGCATCC---TTGCAAGTCTAGCGCCTGCTGCCAT 185 Query 6280 --GCTGACGGCCACCGCGCGGTCGTATGGGTTGAGCGGGT--ACCCGGCGGGAAAGGGGT 6335 || | |||| | |||||| |||||||||||||| ||| |||| || | ||||| Sbjct 186 GCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGGACCCCATGGCATGGGGGT 245 Query 6336 GTGTGAGCGCGCTGGCATACATGCCGCAGA-TGTCGTAGACGTAGACGGG-CTCTGAGAG 6393 | ||||||||| ||| ||||||||||| | ||||||| ||||||| ||| |||| ||| Sbjct 246 GGGTGAGCGCGGAGGCGTACATGCCGCAAAATGTCGTAAACGTAGAGGGGGCTCTCTGAG 305 Query 6394 CACGCCTATGTAAGTGGGGTAGCATCGGCCGCCGCGGATGCTGGCGCGCACGTACTCGTA 6453 | || | || || |||||||||| || |||||||||||||| |||||||| ||||| Sbjct 306 TATTCCAAGATATGTAGGGTAGCATCTTCCACCGCGGATGCTGGCNCGCACGTAATCGTA 365 Query 6454 CATCTCGTG-GGACGGG-GCC-AGGAGG 6478 | ||||| || ||| ||| |||||| Sbjct 366 TAGTTCGTGCCGAGGGGAGCCGAGGAGG 393 >seq169466 Length=306 Score = 100 bits (110), Expect = 6e-17 Identities = 171/245 (70%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 13490 TCGGGTTGAAATTTGACACGCGCAACTTCCGTCTCGGCTACGACGAACAGTC--TGGCCT 13547 ||||| | || |||||||| ||||||||| | || || | ||| ||||| ||| || Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACC--CAGTCACTGGTCT 214 Query 13548 GGTGATGCCCG-GCCACTACGCGCACCAAGCCTTCCATCCGGACGTGGTGCTGTCGCCCG 13606 || |||||| | || | || ||||||||||||| ||| | | || ||| | Sbjct 213 TGTCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGG 154 Query 13607 GCTGCGCCGTGGACTTTACCCAGTCTCGCCTCAATAACTTCCTGGGCATCCGAAAGCGCC 13666 || |||||||| ||||| ||||| | ||||| |||||||||| ||||| | Sbjct 153 ATCCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGC 94 Query 13667 AGCCCTACCAGTTGGGCTTCGTTATCCACTACGACGACCTCAAGGGCGGAAACATCCCTG 13726 | |||| |||| |||||| ||| |||||| ||||| |||| || ||||| || | Sbjct 93 AACCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCG 34 Query 13727 CGCTG 13731 | ||| Sbjct 33 CACTG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104108707785600