Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 7e-13 >seq1 Length=88717973 Score = 87.8 bits (96), Expect = 7e-13 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTC 52168 ||||| ||| |||| |||||| | || | ||| |||||||| || || ||| | | || Sbjct 42818458 ATGGCTTTGCCTCCGTGCCATGCCCTTTGCCAGTTCTATGTT-CTAAATGGTGAATTGTC 42818400 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| | |||||| |||||| |||||| | || || || ||||| |||||||| Sbjct 42818399 TTGCCAACTCTATCAGAGGTCTGGAGACATGGGACTAGGAGTGCCTTTTAATATTGCCAG 42818340 Query 52229 CTATTCCTTGCTGACGCATCTGATTGC 52255 |||||| |||| ||| | ||||||| Sbjct 42818339 CTATTCACTGCTCACGTACATGATTGC 42818313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189408850484000