Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq169466 111 3e-20 >seq169466 Length=306 Score = 111 bits (122), Expect = 3e-20 Identities = 180/254 (71%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 13164 AAGTTTGACACCAGAAACTTCAGGCTAGGCTTTGACCCCGAAACTCAGCTTGTGATGCCC 13223 |||||||||||| | |||||||| || || |||||||| | ||| ||||| |||||| Sbjct 263 AAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCC 204 Query 13224 GGGT-TCTACACTAATGAGGCTTTTCACCCAGACATTGTCCTCAGCC-CCGGCTGT-GCT 13280 | | || || || || || || || |||||||| | | || |||| | | Sbjct 203 TAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTT--GCTGCCGGATCCCGGG 146 Query 13281 GTGGACTTCACTAAAAGCAGGCTGAACAACTTTCTGGGCATTAGAAAGAAGTACCCCTAC 13340 ||||||||||| | ||| | |||| |||||| ||||||| | ||| | | |||| | Sbjct 145 GTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTC 86 Query 13341 GAGGAAGGGTTTATCATAACCTGGGATGACCTCCAGGGAGGGAACATCCCCGCGCTGCTC 13400 |||| || |||| || |||| |||||||| |||| || ||||| ||||| ||| | Sbjct 85 CAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTG 26 Query 13401 GACCTGCACACCTA 13414 || || || |||| Sbjct 25 GATGTGGACGCCTA 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100253892530400