Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq562 113 4e-20 >seq562 Length=6874971 Score = 113 bits (124), Expect = 4e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 18981 CCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTA 19040 |||||||| || | | |||||||| |||||| ||| ||||||||||| |||||| | Sbjct 2708752 CCTCCATGCCATGCTCTTTGTCAGTTCTACGTTCTAAATGGTGAATTATCTTGCCAACTC 2708811 Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100 |||||||| || || |||||||| || || || || ||||| ||||| | ||| | || Sbjct 2708812 TACCAGAGGTCTGGAGATATGGGACTAGGAGTGCCCTTCAATATTGCCAGCTATTCGCTG 2708871 Query 19101 CTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || || ||||| | || ||||| ||||| || || Sbjct 2708872 CTCACATACATGATTGCCCATGTCACAGGGCTAAA 2708906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399470331176175