Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1763 114 2e-20 >seq1763 Length=280674 Score = 114 bits (126), Expect = 2e-20 Identities = 118/152 (78%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||||| ||||||||||| || ||||| || ||||| ||||||| ||| | ||| Sbjct 143259 CCTGGTAGCCGAACTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGG--TAGCG 143316 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 | | |||||||| ||| | ||| ||||| ||||| || ||| | |||||||| || || | Sbjct 143317 GGC-CTGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACGGTGGTGCCTCAGAGCGATGCCA 143375 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAG 83542 ||||||||||||| | || |||||||| ||| Sbjct 143376 CGTTCTCGATGAGGACCACACGGCCCCGAAAG 143407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608744177126600