Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq695 147 4e-30
>seq695
Length=6654852
Score = 147 bits (162), Expect = 4e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 51895 GCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATA 51954
|| ||||||| ||| ||| | |||||||| || |||||||||||||| |||||||||||
Sbjct 198002 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTTTTCATT 197943
Query 51955 CTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTT 52014
|| ||||| |||||||| || ||||||| || || || ||||| ||||| || |||||
Sbjct 197942 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 197883
Query 52015 ACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
|| || | ||||| |||||||| ||| |||| || || ||
Sbjct 197882 ACCTTATGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 197842
Score = 111 bits (122), Expect = 3e-19
Identities = 106/133 (80%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||||||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 195633 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 195574
Query 52117 ATGGCCGCTTGTGGTCCTATGTT-CAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| |||| || ||||| |||||| ||||||||||| || | || ||
Sbjct 195573 TTAGCTGCCTGTGGCCCTAAATTTCAGAA-GTATCTGTGGTGGAAACGATACTTGACCAT 195515
Query 52176 AATGCAGTTGGTA 52188
| |||| ||||||
Sbjct 195514 ATTGCAATTGGTA 195502
Score = 98.7 bits (108), Expect = 2e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 194545 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 194486
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || ||||||||
Sbjct 194485 CCCTAAATGGATGCACTGGAGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 194426
Query 52305 TAACTTCTATTTTAGAACATACAA 52328
||||||||| | | | ||||| ||
Sbjct 194425 TAACTTCTACTATCGGACATATAA 194402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923117001176600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |