Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq1682 383 1e-101
seq1434 84.2 2e-11
>seq1682
Length=19375980
Score = 383 bits (424), Expect = 1e-101
Identities = 614/880 (70%), Gaps = 4/880 (0%)
Strand=Plus/Plus
Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTC 107687
||||| ||| | || | ||||| ||||||||||| || ||||||| |||||
Sbjct 16300606 TACCTGAACCTGACGAAGGACTGCAGCCGCTTCAAGGCGACGCGGCAGTTCATCGAGTTC 16300665
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| ||||| | || ||| || |||||||| |||||||| ||||| |||| || ||
Sbjct 16300666 CCGCTGAGCCAGGAGGAGGCCGAGTTCCCCATCGCCTACTCCATGGTCATCCACGACAAA 16300725
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
|| || | || || |||| ||||| || | |||||||| |||||| | ||||| |||
Sbjct 16300726 ATCGAGATGTTCGAGAGGCTCCTGCGGTCCATCTATGCCCCCCAGAACCTCTACTGCGTC 16300785
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
||| |||| |||||||||| | ||| | ||||| || ||||| | |||||
Sbjct 16300786 CACATGGACAGCAAGTCCCCAGCCTCCTTCCAGGAGGCTGTGCGAGCCATCGCTGCCTGC 16300845
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
|||||||| ||||| ||||||| ||| ||||| || |||||||||||| |
Sbjct 16300846 TTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTACGCCTCCTGGTCCCGG 16300905
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTAC 107987
|||| ||||| |||||||||||| | ||| |||||||||| | ||||| ||| |||
Sbjct 16300906 CTGCAGGCTGATCTGAACTGTATGCAGGACCTGCTCCAGAGTCCGGTGCCCTGGCGCTAC 16300965
Query 107988 TTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCC 108047
| || || || ||||| || ||||||||||| |||||||| |||||||| |||| ||
Sbjct 16300966 CTCCTCAACACTTGCGGCACCGACTTCCCCATTAAGACCAACGCCGAGATCGTCCGCACC 16301025
Query 108048 CTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaa 108107
|| ||| || || |||| |||||| || || || ||| || || | ||| |
Sbjct 16301026 CTGAAGGTGCTGCAGGGGCGGAACAGCATCGAATCGGAGAGGCCCTCAGCCCTCAAGCAG 16301085
Query 108108 aaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAG 108167
| || ||| |||| | | | |||||| | | | || || | || | |||
Sbjct 16301086 GAGCGGTGGCGGTACCACCACAAAGTGACACAGTTCATCTTCCGGACGACCACGCAGAAA 16301145
Query 108168 GACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGA 108227
|| || || || | | ||||||||||| || || || || | |||||| | ||
Sbjct 16301146 GAGCCGCCGCCACACGGCTCCCCCATGTTCACGGGCAACGCGTACATCGTGGCCACGCGG 16301205
Query 108228 GCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAA 108287
|||||||| | || ||||| | | ||| | || | | || |||| |||
Sbjct 16301206 GCCTTTGTGGAGCACGTCTTCCAGAGCCCCACGGTGCAGCAGTTCCTCGAGTGGGCCAAG 16301265
Query 108288 GACACCTATAGCCCCGACGAACACCTCTGGGCCACCCT--TCAGCGTGCTCCGTGGATGC 108345
|||||||| ||||||||||| ||| ||||||||||||| | || ||| | ||| |||
Sbjct 16301266 GACACCTACAGCCCCGACGAGCACGTCTGGGCCACCCTCAACCGCATGCCCGGTG--TGC 16301323
Query 108346 CTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGC 108405
| || |||| || | || ||||| | |||| ||||||| ||||| ||| | |
Sbjct 16301324 CGGGGGCTGTGCCGCACAACGACAAGTTCGAGCTCTCGGACATGAACGCCATGGCCCGCC 16301383
Query 108406 TCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCT 108465
| |||||||||||||||| ||||| || ||||| ||| ||||| || ||||||||
Sbjct 16301384 TGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCGCGCCCTACCCACCCTGCA 16301443
Query 108466 CTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGG 108505
|||| | || | | | ||| ||||| | ||||| |||||
Sbjct 16301444 CTGGCCTGCACCAGCGCGCCGTCTGCGTCTACGGCGCCGG 16301483
>seq1434
Length=7059826
Score = 84.2 bits (92), Expect = 2e-11
Identities = 214/322 (66%), Gaps = 8/322 (2%)
Strand=Plus/Minus
Query 107711 CTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCT 107770
||||||| | |||||| ||| | || || || |||| | ||| || ||||| |
Sbjct 2118155 CTTCCCCGTCGCCTACATCATGACCCTGCACAAGGAGTTTGAGACCTTCGAGCGGCTCTT 2118096
Query 107771 GCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCA 107828
| || ||||| |||||| | ||| | ||||| ||||||||||| |||| | ||
Sbjct 2118095 CAGGGCGGTGTACATGCCCC--AAAACGTCTACTGCGTCCACGTGGACCAGAAGGCGCCG 2118038
Query 107829 GAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCC 107888
| | || || ||||||| || | | | |||||||||||| | ||| | |||
Sbjct 2118037 GCCGCCTTTAAGCAGGCGGTGCAGCGCCTGGTGGGCTGCTTCCCCAACGCTTTCCTCGCC 2117978
Query 107889 AGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGT 107948
| | ||| | |||||| || | | ||| | ||| || ||||| || ||
Sbjct 2117977 TCCAGGATGGAGCGGGTGGTCTACGGCGGGATATCCCGCCTGCGGGCCGACCTCAATTGC 2117918
Query 107949 ATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGA 108006
||| |||| |||| || | | ||||| ||||||||| | || || || ||||||
Sbjct 2117917 ATGAGAGACCTGCTGGCCTCTG--CCGTGCCCTGGAAGTACCTGCTCAACACCTGCGGGC 2117860
Query 108007 CAGACTTCCCCATAAAGACCAA 108028
||||||||| | ||||||||
Sbjct 2117859 AGGACTTCCCCTTGAAGACCAA 2117838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348239449102710
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