Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq562 95.1 8e-15 >seq562 Length=6874971 Score = 95.1 bits (104), Expect = 8e-15 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || || | |||||||||||| || || | ||||| | || Sbjct 2705265 CATATCTTTGTATTCTGCCCCAAAGTGCCTCCACTGGAAACCATAAATAGGTCCCAAATC 2705206 Query 25833 TCCATCTTC-CCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || ||||| | | ||| ||| ||| |||||||| || || | || |||||||| | Sbjct 2705205 CCCCTCTTCTCTTTTGCAGAAA-CCCTGCTTATCCAGGAACTCACGTGACCCATTGGCAT 2705147 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||| ||||| || ||||| | ||||| ||||||| ||||| || || Sbjct 2705146 CCCAAATCTTCACGCCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAACC 2705098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340108934372295