Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1573 107 2e-18 >seq1573 Length=591436 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||| || || || | |||||||||||| || | || |||||||||||||| || || Sbjct 537422 TCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 537481 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | |||||| ||||| ||||||| || |||||||| || || || || || ||||| || Sbjct 537482 AGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 537541 Query 21620 ACTAATCGTTCACC 21633 |||| ||||| || Sbjct 537542 ACTACACGTTCTCC 537555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531854823824600