Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq860 102 1e-16 >seq860 Length=330425 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 |||||| | | ||||||| | ||||||| |||||| || || ||||| ||||| Sbjct 172586 CCACCCAAAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGTTCCGCAATGTGGATGTT 172645 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTT 204036 ||||||||||| || || ||||||| | | ||||| ||||| |||| || || || Sbjct 172646 GAGAGACTGGCTCTGATCAATGAAAGCTCCTCTGTCTGCTGCCATCTTGAGGATAGTTTT 172705 Query 204037 CTGCGAAATCTCCCACACCGTCTT 204060 ||| || ||||||||||||||||| Sbjct 172706 CTGAGAGATCTCCCACACCGTCTT 172729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795086468772400