Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1206 259 6e-64
seq1079 212 8e-50
>seq1206
Length=7854729
Score = 259 bits (286), Expect = 6e-64
Identities = 1035/1606 (64%), Gaps = 50/1606 (3%)
Strand=Plus/Plus
Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627
|||||| || |||| || || || || ||||| ||||| |||||||| || ||
Sbjct 7504379 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATGCGATCAATGTCATCCTTGCT 7504438
Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687
| | |||||| ||||| || ||||| ||||| | ||| |||| | ||| || |
Sbjct 7504439 GAGGCGCCCCTTGTCATTGGTGATCGTGATCTTGTTCTCTTTTCCCGTGCTCTTGTCCAC 7504498
Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747
|||||| || |||| |||||||||||||| | || || | || | | | ||| |
Sbjct 7504499 AGCACTGACGTTCAGGATACCATTTGCATCTATGTCAAAAGTGACCTCGA--TCTGGGGG 7504556
Query 6748 ACCCCTCGGTGCG--GCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCC 6805
|| || ||| ||| | || || ||||||| |||||| | || || || |||| |||
Sbjct 7504557 ACTCCACGGGGCGCTGGGGGGATGCCCGTTAGATCAAACTTGCCCAGCAAGTTGTTGTCC 7504616
Query 6806 GTCGCCTTCTTACGTTCACCTTCATAGACTTTAA--TTGTCACCGCAGGTTGATTATCTT 6863
| | | | | ||||| ||| | || | | | ||| || || || ||
Sbjct 7504617 TTTGTCATAGCCCTCTCACCCTCAAACACCTGGACCAGGACACTGC--TCTGGTTGTCCG 7504674
Query 6864 GTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923
|| | |||| | || || || | || || || || || | | || | |
Sbjct 7504675 AGTAGGTGGTGAAGGTCTGGGTTTGTTTGGTAGGGATGGTAGTGTTACGCTTGATGAGAG 7504734
Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983
|||||| | ||||| || || | || || |||||||| || || ||||| || |
Sbjct 7504735 CGGTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGAGGCGTGACATCCAACAGGA 7504794
Query 6984 ACAGGTCTTGAACAGATTCGTTCCCT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041
||| || || || ||| | || || ||| | | ||| || ||||| || | ||
Sbjct 7504795 GCAGATCCTG--CACGTTCTCTGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGC 7504852
Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101
|| || || || || ||||| || || || | || || || ||||| || || || |
Sbjct 7504853 GCCATAAGCAACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAA 7504912
Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161
||| | || | || || || ||||| || || || ||||| || | || || ||
Sbjct 7504913 GTCCTGCAGCAGCTTCTGGATCTTGGGGATGCGCGTGGAGCCACCCACTAGCACTATCTC 7504972
Query 7162 ATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACA 7221
| | | || || | || | || || || | || || || || ||||
Sbjct 7504973 CTGGATCTGACCCTTGTCTAGTTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCAGCGT 7505032
Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281
|||||| | || | || |||||||| || ||||| |||||||| || |||||
Sbjct 7505033 GCCACGGAAGAGATCAGCATTGAGCTCCTCAAAGCGGGCACGAGTAATGGAGGTGTAGAA 7505092
Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA---TAA 7338
|||| ||| ||||| | ||| || || || ||| | | ||| || ||||| |
Sbjct 7505093 GTCAATGCCCTCGTAGAGCGAGTCGATCTCGATGCTAGCTTG---GGTGGAAGAGCTGAG 7505149
Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398
|| ||||| || | |||||| || || || | || | | |||||| || || |
Sbjct 7505150 AGTACGCTTAGCCCTCTCACAAGCGGTACGCAGCCGCCTCACTGCACGCTTATTGCCAGC 7505209
Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGA--AGGAGTCTCGA 7455
||| || ||| || |||||||| |||||||| | | || || | | | | |
Sbjct 7505210 AATGTCACGCTTGTGCTTACGTTTGAACTCTTCTACAAAATGGTTCACCATGCGGTT--- 7505266
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|| || || || ||||||| || ||||| || || || | || || |||||||| ||
Sbjct 7505267 GTCAAAGTCCTCCCCACCCAGATGGGTATCACCAGCTGTGGACTTCACCTCAAAGATGCC 7505326
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | | | || ||||| || || || || |||| |||||| ||||| ||
Sbjct 7505327 ATCCTCAATGGTGAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATGAGCAC 7505386
Query 7576 GTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629
|||| | || | | | ||||| || | || ||||| ||||| || || ||
Sbjct 7505387 GTTCTTCTCCCCAGCCCGGGTACCTTTCTTGTCCAAGCCATACGCTATAGCAGCTGCTGT 7505446
Query 7630 TGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688
|| ||||| || ||||| | ||| || ||||||| || || | |||||||| || |
Sbjct 7505447 GGGCTCATTGATGATACGCATCACA-TTAAGGCCAGTGATGGTGCCAGCATCTTTGGTGG 7505505
Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748
| || || || || || || ||||| || || || || | ||| || | | || ||
Sbjct 7505506 CCTGGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCATTCTGCACCTTGC 7505565
Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808
|| || || | || || || || ||||| |||||||| ||||| || ||||| |
Sbjct 7505566 GGCCCAGGTAGGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCT 7505625
Query 7809 CAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCA 7867
| | | | | || ||| | || || || | || |||| | | |||| || ||
Sbjct 7505626 CTG-GGAAGAAGGTCTTCATCTCCCCCTTGTACTCCACTTGCACCTTGGGCTT----GC- 7505679
Query 7868 GCACCGGGGATAACC---TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TC 7923
|||| | | ||| ||| ||| | ||||| || || ||| || || ||
Sbjct 7505680 -CACCTTCGTTCACCACTCGGAACGGCCAGTGCTTCATGTCCGACTGCACC-GTGGGATC 7505737
Query 7924 CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983
|||| | || || |||||||| |||||||| | ||||| | |||||||| ||
Sbjct 7505738 ATCGTACTTGCGGCCAATGAGACGCTTAGCATCAAAGATGGTGTTGGTAGGGTTCATAGC 7505797
Query 7984 TGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTA 8043
| |||||||| || || || ||||| ||||| || || || ||||| || || ||
Sbjct 7505798 TACCTGGTTCTTGGCAGCATCACCGATGAGACGCTCGGTA---TCGGTAAAGGCCACATA 7505854
Query 8044 CGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCC 8102
| |||| || || || || || ||||| || || || || || || | | | ||
Sbjct 7505855 -GCTGGGCGTGGTGCGGTTGCCCTGGTCATTGGCGATGATCTCCACTTTGCCATGCTGGA 7505913
Query 8103 AGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|||| || ||||| |||||||| || || || || || ||||| ||
Sbjct 7505914 AGACACCCACGCAGGAATACGTGGTGCCCAAGTCGATGCCGATCGC 7505959
>seq1079
Length=2839117
Score = 212 bits (234), Expect = 8e-50
Identities = 377/546 (69%), Gaps = 12/546 (2%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
||||| || || || || ||||| || || || | || |||| ||||| || || ||
Sbjct 1550885 GCCCCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCATTGAAG 1550944
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
| ||| | || || ||||| || ||||| || || || ||||| ||||| |||||
Sbjct 1550945 AAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACGATG 1551004
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA-- 7217
|| | | | |||||| || | || | || || || | ||||| ||||| ||||
Sbjct 1551005 TCGTGGATCTGCGATTTGTCTAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 1551064
Query 7218 -TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276
||| |||||||| ||| | ||| || ||||| || || | ||||||||| ||
Sbjct 1551065 GTACC---ACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGTG 1551121
Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336
||||| |||| ||| || || | |||||||||||||| | | || | | |||||
Sbjct 1551122 TAGAAGTCAATGCCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTAGAAGAG 1551181
Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396
| || |||||||| || ||||| || || || | ||||||| || | | ||| ||
Sbjct 1551182 AGGGTACGCTTTGCACGTTCACATGCAGTGCGCAGGCGACGAACTGCTCTCTTGTTCTCG 1551241
Query 7397 GAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTC 7453
||||||||||| || || || || || || | ||||| || || | | | |
Sbjct 1551242 CTGATATCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT- 1551300
Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513
||| |||||||| ||||||||||| ||||| || || || | ||| || ||||||||
Sbjct 1551301 --ATCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATG 1551358
Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|| | || || | | | || |||||||| || ||||| || |||||||| || ||
Sbjct 1551359 CCATCCTCGATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGA 1551418
Query 7574 ACGTTC 7579
||||||
Sbjct 1551419 ACGTTC 1551424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635077900708600
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