Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1189 96.9 4e-15
seq1466 93.3 5e-14
seq1206 93.3 5e-14
seq562 93.3 5e-14
seq6912 91.5 2e-13
seq558 89.7 6e-13
seq1946 84.2 3e-11
>seq1189
Length=11086764
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 6834841 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 6834782
Query 136777 GGGAACAGCTTTT 136789
|| ||| ||||
Sbjct 6834781 CGGGCCAGGTTTT 6834769
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 2548588 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 2548646
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 5020452 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 5020394
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 6831181 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 6831123
>seq1466
Length=10938614
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 7018288 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 7018346
>seq1206
Length=7854729
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 3558933 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 3558991
>seq562
Length=6874971
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||
Sbjct 5489964 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACGGGTTCGATCCCTGT 5490022
>seq6912
Length=3990798
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||
Sbjct 3233885 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCAATCCCCGTA 3233944
Query 136777 GGGAACAGC--TTTTAG 136791
|| |||| ||||||
Sbjct 3233945 CGGGCCAGCCATTTTAG 3233961
>seq558
Length=1264419
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 1212021 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1211963
>seq1946
Length=1778888
Score = 84.2 bits (92), Expect = 3e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||| ||
Sbjct 87868 TAGCTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAGGTCACAGGTTCGATCCCTGT 87810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588925090387000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |