Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq66 87.8 5e-12 >seq66 Length=40132 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 302616 AGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAG 302675 || ||| || || || || || || || || | || |||||||| || |||||||| | Sbjct 25363 AGCTGTCTTGACGGCGGTGTCGATGAGGCCCTCGCGGCCACCCATGGCGTGGAAGAAGAA 25304 Query 302676 CTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGA 302735 ||| || ||||| | | ||||| |||| ||||| || || |||||| Sbjct 25303 CTCGGTGGGGGTGAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCC 25244 Query 302736 ATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTT 302795 | |||| |||| | ||||| ||||| || | || || ||||| | ||||| ||||| Sbjct 25243 GTAGTCGTCCTTGATGAAGTGGGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATGCGCTT 25184 Query 302796 TCCATCAACGTTCTGCTGTCCCA 302818 || || ||||||||||| |||| Sbjct 25183 GCCCTCCACGTTCTGCTGCCCCA 25161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471687199260355