Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq695 138 2e-27
>seq695
Length=6654852
Score = 138 bits (152), Expect = 2e-27
Identities = 127/161 (79%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| ||||||||||| ||| | || ||||| || |||||||| |||||||| ||||||||
Sbjct 198002 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTTTTCATT 197943
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| ||||| || ||||| || |||| || || || || ||||| ||||| || |||||
Sbjct 197942 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 197883
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| ||| | ||| | |||||||| ||| ||||||| || ||
Sbjct 197882 ACCTTATGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 197842
Score = 104 bits (114), Expect = 4e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| ||||| || |||||| ||||| | ||||| ||||| |||||||| | ||||||||
Sbjct 195633 GCTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 195574
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | |||||| | |||||||| || ||| | || |||
Sbjct 195573 TTAGCTGCCTGTGGCCCTAAATTTCAGAAGTATCTGTGGTGGAAACGATACTTGACCATA 195514
Query 58661 ATGCAATTGGTA 58672
|||||||||||
Sbjct 195513 TTGCAATTGGTA 195502
Score = 84.2 bits (92), Expect = 4e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728
||| || |||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 194545 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 194486
Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788
|| ||||||| ||| ||| || || ||||| || | || || || || |||||||
Sbjct 194485 CCCTAAATGGATGCACTGGAGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGG 194426
Query 58789 TAACTTCTATTTTAGAACATACAA 58812
||||||||| | | | ||||| ||
Sbjct 194425 TAACTTCTACTATCGGACATATAA 194402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903333111394400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |