Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq586 100 9e-18
seq574 98.7 3e-17
seq1713 86.0 2e-13
>seq586
Length=297847
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 271089 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 271148
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 271149 CCCGGGTTTCGGC 271161
>seq574
Length=2205963
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 744168 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 744109
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 744108 CCGGGTTTCGGC 744097
>seq1713
Length=1064733
Score = 86.0 bits (94), Expect = 2e-13
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA- 2826
|||||||| ||||||| |||||||| ||||||||||||| ||||||||||||||| ||
Sbjct 630 GGCTGAAGCAGCTCAGCTGGGAGAGTGTTAGACTGAAGATATAAAGGTCCCTGGTTGAAG 571
Query 2827 CCCCGGGCT 2835
||| |||||
Sbjct 570 CCCTGGGCT 562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848401250175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |