Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014- 06-06] 6,915 sequences; 1,225,041,896 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1206 226 9e-54 seq1079 224 3e-53 seq551 143 8e-29 seq1011 134 4e-26 seq1400 114 4e-20 seq712 93.3 1e-13 seq1573 84.2 7e-11 >seq1206 Length=7854729 Score = 226 bits (250), Expect = 9e-54 Identities = 934/1458 (64%), Gaps = 29/1458 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || || || || ||||| || || | ||| | || ||| Sbjct 7505959 GCGATCGGCATCGACTTGGGCACCACGTATTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 7505900 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | || ||||| || || || |||||| Sbjct 7505899 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTATGTGGCCTTTACC 7505840 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || |||||| |||| || || || | ||| || || | || Sbjct 7505839 GATACCGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTAGCTATGAACCCTACCAAC 7505780 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || | |||||||||||||| || ||||| | |||| || | | || || Sbjct 7505779 ACCATCTTTGATGCTAAGCGTCTCATTGGCCGCAAGTAC----GATGATCCCACGGTGCA 7505724 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 || || | || || | || || || || || || |||| || || | | Sbjct 7505723 GTCGGACATGAAGCACTGGCCGTTCCGAGTGGTG---AACGAAGGTGGCAAGCCCAAGGT 7505667 Query 349495 TGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553 | || || || || || || | || || || || || || || || || |||| Sbjct 7505666 GCAAGTGGAGTACAAGGGGGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCCATGG 7505608 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | | || |||||||| |||||||| || || | || | || |||||| Sbjct 7505607 TCCTTACCAAGATGAAGGAGATTGCTGAGGCCTACCTGGGCCGCAAGGTGCAGAATGCTG 7505548 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | || || || || || || || ||||| ||||||| || || ||||||||||||| Sbjct 7505547 TCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCA 7505488 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||| | || | ||||| | | || || ||||| ||||| || || || || || | Sbjct 7505487 CCATCACTGGCCTTAATGTGATGCGTATCATCAATGAGCCCACAGCAGCTGCTATAGCGT 7505428 Query 349734 ATGGGCTTGATAAAATGAGTGACCAAG------aaaaaaaTATTCTTATTTTTGATTTAG 349787 |||| | || || | || || | | || || | || || ||||| || | Sbjct 7505427 ATGGCTTGGACAAGAAAGGTACCCGGGCTGGGGAGAAGAACGTGCTCATCTTTGACTTGG 7505368 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 | || || ||||| ||||| || | || || |||| || || || ||||| || || Sbjct 7505367 GAGGGGGCACTTTCGATGTGTCCATCCTCACCATTGAGGATGGCATCTTTGAGGTGAAGT 7505308 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT 349907 | || ||||||||||| ||||| ||||| || || ||||| || || | || |||| Sbjct 7505307 CCACAGCTGGTGATACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATT 7505248 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966 |||| |||| || || ||| |||| || ||| |||| | ||| | ||| || Sbjct 7505247 TTGTAGAAGAGTTCAAACGT-AAGCACAAGCGTGACATTGCTGGCAATAAGCGTGCAGTG 7505189 Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAAC 350025 | || || | || || ||||| | ||||||||| | || | | ||| | |||||| | Sbjct 7505188 AGGCGGCTGCGTACCGCTTGTGAGAGGGCTAAGCGTACTCTCAGC-TCTTCCACCCAAGC 7505130 Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 || || || || || || || |||| || |||| | || ||||| ||||| Sbjct 7505129 TAGCATCGAGATCGACTCGCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGC 7505070 Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145 || ||||| || | | ||||| || | | || |||| || ||||| || | Sbjct 7505069 CCGCTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGCACGCTGGAGCCAGTGGAGAAGGC 7505010 Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205 | ||||| ||| | ||| |||||| | || |||| |||| ||||| || Sbjct 7505009 CCTGCGTGATGCCAAACTAGACAAGGGTCAGATCCAGGAGATAGTGCTAGTGGGTGGCTC 7504950 Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTT 350264 || || || || || | || || | || || || || ||||||||||| | | Sbjct 7504949 CACGCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCTTCAATGGCAAAGAGCTCAA 7504890 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324 | ||| | || |||||||||||||||||||| ||||| |||||||| || ||| |||| Sbjct 7504889 CAAGAGC-ATCAATCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAAGCAGCTATCC 7504831 Query 350325 TATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTT 350384 | ||| | ||| || | | ||||| | || | ||||| || || || | Sbjct 7504830 TCATGGGAGACAAGTCAGAGAACGTGCAGGATCTGCTCCTGTTGGATGTCACGCCTCTGT 7504771 Query 350385 CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTG 350444 | || || | || || |||||| ||| ||||| | ||| || | || | ||| Sbjct 7504770 CCCTGGGCATTGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGTAACACTACCA 7504711 Query 350445 TACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC-- 350502 | ||||| ||| | |||| || || | || | | || || ||| ||| || | Sbjct 7504710 TCCCTACCAAACAAACCCAGACCTTCACCACCTACTCGGACAACCAG--AGCAGTGTCCT 7504653 Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562 | || || ||||| ||||| | ||| || || || || || || || | || Sbjct 7504652 GGTCCAGGTGTTTGAGGGTGAGAGGGCTATGACAAAGGACAACAACTTGCTGGGCAAGTT 7504593 Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 | |||| | || || ||| ||| | ||||| || ||||| || ||| |||| || Sbjct 7504592 TGATCTAACGGGCATCCCCCCAGCGCCCCGTGGAGTCCCCCAGATCGAGGTCACTTTTGA 7504533 Query 350623 TATTGATTCAAATGGTAT 350640 || ||| |||||||||| Sbjct 7504532 CATAGATGCAAATGGTAT 7504515 >seq1079 Length=2839117 Score = 224 bits (248), Expect = 3e-53 Identities = 379/541 (70%), Gaps = 12/541 (2%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| ||||| | || ||||| || |||||||| ||| | || || | || || | Sbjct 1551419 TTCTTATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATCGAGGATG 1551360 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | ||||| |||||||| || | ||||||||||||||||||| Sbjct 1551359 GCATCTTTGAGGTGAAATCCACTGCAGGTGATACTCACTTGGGTGGAGAAGATTTTGATA 1551300 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGA 349948 | || | || || || | ||||| ||||| ||||| || | ||||| | Sbjct 1551299 ACCGCATGGTCAACCACTTCATCGCTGAATTCAAGCG-CAAGCACAAGAAAGATATCAGC 1551241 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || |||||| | |||||||| | ||||| ||||||||||| |||||| || | Sbjct 1551240 GAGAACAAGAGAGCAGTTCGTCGCCTGCGCACTGCATGTGAACGTGCAAAGCGTACCCTC 1551181 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 || |||| || || || |||||||||||||||||| ||| |||| || |||| Sbjct 1551180 TCTTCTAGCACTCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGCATTGACTTCTAC 1551121 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126 | || ||||| | ||||| |||||||| || ||| || || || | | || Sbjct 1551120 ACGTCCATTACCAGAGCTCGCTTTGAAGA--GCTGAATGCTGACCTGTTCCGTGGTACCC 1551063 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 |||||||||||||||| | | ||||| ||| | |||| ||||| | || Sbjct 1551062 TGGATCCTGTGGAAAAGGCCCTGCGGGATGCCAAACTAGACAAATCGCAGATCCACGACA 1551003 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || || |||||||| ||||| ||||| ||||| |||| | | || || || | Sbjct 1551002 TCGTGTTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGACTTCT 1550943 Query 350247 TTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 | ||||||||||| || | ||| | || ||||| ||||||||||| || ||||| | Sbjct 1550942 TCAATGGCAAAGA--GTTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGCTTATGGGG 1550886 Query 350304 C 350304 | Sbjct 1550885 C 1550885 Score = 141 bits (156), Expect = 3e-28 Identities = 353/531 (66%), Gaps = 4/531 (1%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320 |||| ||||| || ||||||||||| || || || | | | | || ||||||||||| Sbjct 1550883 CTGCCCCATAAGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAACTCTTTGCCATTG 1550941 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || |||| || ||||| ||||| || | ||| || ||||| || || || Sbjct 1550942 AAGAAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACG 1551001 Query 183381 ACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 | || | ||| | ||| ||| |||| | ||| | | ||||| ||||| || Sbjct 1551002 ATGTCGTGGATCTGCGATTTGTCTAGTTTG-GCATCCCGCAGGGCCTTTTCCACAGGATC 1551060 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 || || | || | || | | |||||| || | ||||| || | || | Sbjct 1551061 CAGGGTACCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGT 1551120 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 | |||||||| || | ||| | |||||||||||||| | || || || || Sbjct 1551121 GTAGAAGTCAATGCCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTAGAAGA 1551180 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 | || | || || ||||||||||| || | || ||||| | || ||| || || Sbjct 1551181 GAGGGTACGCTTTGCACGTTCACATGCAGTGCGCAGGCGACGAACTGCTCTCTTGTTCTC 1551240 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 | ||||||| || || || | || ||||||| || || || | | | | | Sbjct 1551241 GCTGATATCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT 1551300 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 |||||||||||| ||||| || || ||||| || ||||| | ||| || ||||| || || Sbjct 1551301 ATCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATGCC 1551360 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || ||| | | |||||| |||||||| || ||||| || | ||||| Sbjct 1551361 ATCCTCGATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAA 1551411 Score = 109 bits (120), Expect = 2e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | ||||| ||| | || || || ||||| ||||||| ||| | ||| ||| Sbjct 1552732 GCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAAG 1552673 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| ||||| || |||||| | || |||||| |||||||| || || Sbjct 1552672 GTGGAGATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCACA 1552613 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | ||||||||||| ||||||| || |||| ||| ||||||| || Sbjct 1552612 GACACAGAGAGGTTGATTGGTGATGCTGCAAAGAACCAAGTTGCAATGAATCCAACCAAC 1552553 Query 349379 ACGGTTTTTG 349388 || || |||| Sbjct 1552552 ACAGTCTTTG 1552543 Score = 104 bits (114), Expect = 7e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||| | ||||||||||||||||| ||||| ||||||| || |||||||||||| Sbjct 1551673 GCTGTTGTCACTGTACCAGCCTATTTCAATGACTCCCAGCGCCAGGCTACAAAAGATGCT 1551614 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || | || || ||| | || || || |||| || || || || |||||||| || ||| Sbjct 1551613 GGAACTATCGCAGGGCTCAACGTACTCCGAATTATCAACGAGCCGACTGCTGCTGCTATT 1551554 Query 349730 GCATATGGGCTTGATAA 349746 || ||||| || || || Sbjct 1551553 GCTTATGGTCTGGACAA 1551537 >seq551 Length=8489217 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || ||||| ||||| || || || || || || || || || ||||||||| Sbjct 2123765 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 2123824 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||||||||| ||||| || ||| Sbjct 2123825 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2123884 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || ||||| || || || | ||| Sbjct 2123885 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2123944 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2123945 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2123976 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || ||||| ||||| || || || || || || || | || ||||||||| Sbjct 2123309 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 2123368 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||||||||| ||||| || ||| Sbjct 2123369 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2123428 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || ||||| || || || | ||| Sbjct 2123429 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2123488 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2123489 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2123520 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| ||||| || || || || || || || | || ||||||||||| | Sbjct 2123542 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCA 2123600 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| || | ||||| ||||||||||| ||||| || ||||| | Sbjct 2123601 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGA 2123660 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | ||| || ||||| || || || | ||||| | Sbjct 2123661 TCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 2123720 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || ||||| |||||||| Sbjct 2123721 CAGTCAGGGTCTTCACAAAGATCTGCAT 2123748 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||| || ||||| ||||| || || || || || || || | || ||||||||| Sbjct 2123993 AGAACATTGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 2124052 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||||||||| ||||| || ||| Sbjct 2124053 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2124112 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || ||||| || || || | ||| Sbjct 2124113 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2124172 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || | || || ||||| ||||||||| Sbjct 2124173 TTCCCTGTCAAGGTCTTCACAAAGATCTGCATT 2124205 >seq1011 Length=3435084 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 2733949 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734008 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 2734009 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734068 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2734069 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734128 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2734129 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734160 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 2734177 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734236 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 2734237 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734296 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2734297 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734356 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2734357 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734388 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 2734405 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734464 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 2734465 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734524 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2734525 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734584 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2734585 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734616 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || ||||| || || || || || ||||| | || ||||||||| Sbjct 2734633 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734692 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 2734693 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734752 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2734753 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734812 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 2734813 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734844 >seq1400 Length=991305 Score = 114 bits (126), Expect = 4e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| |||||||| |||||||| || |||||||||||||| ||||| |||||| | Sbjct 231848 CAGCCTGAACAGCAGCACCATAGGCTACAGCTTCATCTGGATTAATGCCACGAGAAGGCT 231907 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| || |||||| || | ||| || ||||| || || | ||| || |||| Sbjct 231908 CCTTGCCATTGAAGAATTCTTTAACAAGTTGCTGTATTTTGGGGATGCGAGTAGAGCCAC 231967 Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429 | || | |||| ||||| |||| ||| | | | ||||||| | |||||| | Sbjct 231968 CAACAAGAACTATCTCATCAATATCGGATTTCTTTAGGTCAGAATCTTCCAGAACTTTCT 232027 Query 183430 CAACAGGGTCCATAGT 183445 |||||| | |||||| Sbjct 232028 GAACAGGCTTCATAGT 232043 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| ||||| | |||||||| ||||| || || || ||| | || || | | Sbjct 231989 ATTGATGAGATAGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTTGTT 231930 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 || || || |||||||| || |||||| | |||||||||||||||||||| || Sbjct 231929 AAAGAATTCTTCAATGGCAAGGAGCCTTCTCGTGGCATTAATCCAGATGAAGCTGTAGCC 231870 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 |||||||||||||||||||| Sbjct 231869 TATGGTGCTGCTGTTCAGGC 231850 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || ||||| ||||| | || || | ||| | | |||| || ||| ||| Sbjct 232765 ACAGCTGCTGCCATTGCTTATGGATTGGACAAGA-GAGAGGGCGAGAAGAA--TATCCTT 232709 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| || |||||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 232708 GTATTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 232649 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 ||||||||| || ||| ||| || || || || ||||| ||||| |||||| | ||| Sbjct 232648 TTTGAAGTTGTGGCTACTAATGGAGACACCCACCTGGGTGGGGAAGACTTTGATCAACGT 232589 Score = 96.9 bits (106), Expect = 1e-14 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| |||| || |||||||| || |||||||| |||||| || |||||||||| Sbjct 232950 ATGCTGTTGTTACAGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACAAAAGATG 232891 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713 |||| | ||||| || || ||||| | ||||| |||||||| || Sbjct 232890 CTGGTACTATTGCTGGATTGAATGTGATGAGAATTATTAATGAGCC 232845 >seq712 Length=9974483 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||||||||| || ||||| | ||| || |||||||| | ||| || |||||||| | Sbjct 8741421 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAATTGCTTACCAGCAAAAA 8741480 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || |||||||| |||||||||||| Sbjct 8741481 TCAGTCGCTGCTGATCGGGAGGAATTCCT 8741509 >seq1573 Length=591436 Score = 84.2 bits (92), Expect = 7e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781 |||||||||| || | |||||| ||||| || | |||||||||||| ||||| || | Sbjct 537420 CCTCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 537479 Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841 ||| |||||| |||| ||| | || ||||| || || ||||| || ||||| | Sbjct 537480 TCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 537539 Query 223842 CTACTA 223847 |||||| Sbjct 537540 CTACTA 537545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515120150827745