Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1206 226 9e-54
seq1079 224 3e-53
seq551 143 8e-29
seq1011 134 4e-26
seq1400 114 4e-20
seq712 93.3 1e-13
seq1573 84.2 7e-11
>seq1206
Length=7854729
Score = 226 bits (250), Expect = 9e-54
Identities = 934/1458 (64%), Gaps = 29/1458 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || ||||| || || || || ||||| || || | ||| | || |||
Sbjct 7505959 GCGATCGGCATCGACTTGGGCACCACGTATTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 7505900
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || ||||| || || ||| | || ||||| || || || ||||||
Sbjct 7505899 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTATGTGGCCTTTACC 7505840
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| | || |||||| |||| || || || | ||| || || | ||
Sbjct 7505839 GATACCGAGCGTCTCATCGGTGATGCTGCCAAGAACCAGGTAGCTATGAACCCTACCAAC 7505780
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434
|| | |||||||||||||| || ||||| | |||| || | | || ||
Sbjct 7505779 ACCATCTTTGATGCTAAGCGTCTCATTGGCCGCAAGTAC----GATGATCCCACGGTGCA 7505724
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
|| || | || || | || || || || || || |||| || || | |
Sbjct 7505723 GTCGGACATGAAGCACTGGCCGTTCCGAGTGGTG---AACGAAGGTGGCAAGCCCAAGGT 7505667
Query 349495 TGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGG 349553
| || || || || || || | || || || || || || || || || ||||
Sbjct 7505666 GCAAGTGGAGTACAAGGGGGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCCATGG 7505608
Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613
| | || |||||||| |||||||| || || | || | || ||||||
Sbjct 7505607 TCCTTACCAAGATGAAGGAGATTGCTGAGGCCTACCTGGGCCGCAAGGTGCAGAATGCTG 7505548
Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673
| || || || || || || || ||||| ||||||| || || |||||||||||||
Sbjct 7505547 TCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCA 7505488
Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733
||| | || | ||||| | | || || ||||| ||||| || || || || || |
Sbjct 7505487 CCATCACTGGCCTTAATGTGATGCGTATCATCAATGAGCCCACAGCAGCTGCTATAGCGT 7505428
Query 349734 ATGGGCTTGATAAAATGAGTGACCAAG------aaaaaaaTATTCTTATTTTTGATTTAG 349787
|||| | || || | || || | | || || | || || ||||| || |
Sbjct 7505427 ATGGCTTGGACAAGAAAGGTACCCGGGCTGGGGAGAAGAACGTGCTCATCTTTGACTTGG 7505368
Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847
| || || ||||| ||||| || | || || |||| || || || ||||| || ||
Sbjct 7505367 GAGGGGGCACTTTCGATGTGTCCATCCTCACCATTGAGGATGGCATCTTTGAGGTGAAGT 7505308
Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT 349907
| || ||||||||||| ||||| ||||| || || ||||| || || | || ||||
Sbjct 7505307 CCACAGCTGGTGATACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATT 7505248
Query 349908 TTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATG 349966
|||| |||| || || ||| |||| || ||| |||| | ||| | ||| ||
Sbjct 7505247 TTGTAGAAGAGTTCAAACGT-AAGCACAAGCGTGACATTGCTGGCAATAAGCGTGCAGTG 7505189
Query 349967 CGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAAC 350025
| || || | || || ||||| | ||||||||| | || | | ||| | |||||| |
Sbjct 7505188 AGGCGGCTGCGTACCGCTTGTGAGAGGGCTAAGCGTACTCTCAGC-TCTTCCACCCAAGC 7505130
Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085
|| || || || || || || |||| || |||| | || ||||| |||||
Sbjct 7505129 TAGCATCGAGATCGACTCGCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGC 7505070
Query 350086 TCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGT 350145
|| ||||| || | | ||||| || | | || |||| || ||||| || |
Sbjct 7505069 CCGCTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGCACGCTGGAGCCAGTGGAGAAGGC 7505010
Query 350146 ATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTC 350205
| ||||| ||| | ||| |||||| | || |||| |||| ||||| ||
Sbjct 7505009 CCTGCGTGATGCCAAACTAGACAAGGGTCAGATCCAGGAGATAGTGCTAGTGGGTGGCTC 7504950
Query 350206 TACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTT 350264
|| || || || || | || || | || || || || ||||||||||| | |
Sbjct 7504949 CACGCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCTTCAATGGCAAAGAGCTCAA 7504890
Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTT 350324
| ||| | || |||||||||||||||||||| ||||| |||||||| || ||| ||||
Sbjct 7504889 CAAGAGC-ATCAATCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAAGCAGCTATCC 7504831
Query 350325 TATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTT 350384
| ||| | ||| || | | ||||| | || | ||||| || || || |
Sbjct 7504830 TCATGGGAGACAAGTCAGAGAACGTGCAGGATCTGCTCCTGTTGGATGTCACGCCTCTGT 7504771
Query 350385 CGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTG 350444
| || || | || || |||||| ||| ||||| | ||| || | || | |||
Sbjct 7504770 CCCTGGGCATTGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGTAACACTACCA 7504711
Query 350445 TACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAAC-- 350502
| ||||| ||| | |||| || || | || | | || || ||| ||| || |
Sbjct 7504710 TCCCTACCAAACAAACCCAGACCTTCACCACCTACTCGGACAACCAG--AGCAGTGTCCT 7504653
Query 350503 AATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATT 350562
| || || ||||| ||||| | ||| || || || || || || || | ||
Sbjct 7504652 GGTCCAGGTGTTTGAGGGTGAGAGGGCTATGACAAAGGACAACAACTTGCTGGGCAAGTT 7504593
Query 350563 TACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622
| |||| | || || ||| ||| | ||||| || ||||| || ||| |||| ||
Sbjct 7504592 TGATCTAACGGGCATCCCCCCAGCGCCCCGTGGAGTCCCCCAGATCGAGGTCACTTTTGA 7504533
Query 350623 TATTGATTCAAATGGTAT 350640
|| ||| ||||||||||
Sbjct 7504532 CATAGATGCAAATGGTAT 7504515
>seq1079
Length=2839117
Score = 224 bits (248), Expect = 3e-53
Identities = 379/541 (70%), Gaps = 12/541 (2%)
Strand=Plus/Minus
Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829
||||||| ||||| | || ||||| || |||||||| ||| | || || | || || |
Sbjct 1551419 TTCTTATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACTATCGAGGATG 1551360
Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889
| || ||||| || ||| | ||||| |||||||| || | |||||||||||||||||||
Sbjct 1551359 GCATCTTTGAGGTGAAATCCACTGCAGGTGATACTCACTTGGGTGGAGAAGATTTTGATA 1551300
Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGA 349948
| || | || || || | ||||| ||||| ||||| || | ||||| |
Sbjct 1551299 ACCGCATGGTCAACCACTTCATCGCTGAATTCAAGCG-CAAGCACAAGAAAGATATCAGC 1551241
Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008
|| || |||||| | |||||||| | ||||| ||||||||||| |||||| || |
Sbjct 1551240 GAGAACAAGAGAGCAGTTCGTCGCCTGCGCACTGCATGTGAACGTGCAAAGCGTACCCTC 1551181
Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068
|| |||| || || || |||||||||||||||||| ||| |||| || ||||
Sbjct 1551180 TCTTCTAGCACTCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGCATTGACTTCTAC 1551121
Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAA 350126
| || ||||| | ||||| |||||||| || ||| || || || | | ||
Sbjct 1551120 ACGTCCATTACCAGAGCTCGCTTTGAAGA--GCTGAATGCTGACCTGTTCCGTGGTACCC 1551063
Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186
|||||||||||||||| | | ||||| ||| | |||| ||||| | ||
Sbjct 1551062 TGGATCCTGTGGAAAAGGCCCTGCGGGATGCCAAACTAGACAAATCGCAGATCCACGACA 1551003
Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246
| || || |||||||| ||||| ||||| ||||| |||| | | || || || |
Sbjct 1551002 TCGTGTTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGACTTCT 1550943
Query 350247 TTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303
| ||||||||||| || | ||| | || ||||| ||||||||||| || ||||| |
Sbjct 1550942 TCAATGGCAAAGA--GTTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGCTTATGGGG 1550886
Query 350304 C 350304
|
Sbjct 1550885 C 1550885
Score = 141 bits (156), Expect = 3e-28
Identities = 353/531 (66%), Gaps = 4/531 (1%)
Strand=Plus/Plus
Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTA 183320
|||| ||||| || ||||||||||| || || || | | | | || |||||||||||
Sbjct 1550883 CTGCCCCATAAGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAACTCTTTGCCATTG 1550941
Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380
|| || || |||| || ||||| ||||| || | ||| || ||||| || || ||
Sbjct 1550942 AAGAAGTCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACG 1551001
Query 183381 ACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439
| || | ||| | ||| ||| |||| | ||| | | ||||| ||||| ||
Sbjct 1551002 ATGTCGTGGATCTGCGATTTGTCTAGTTTG-GCATCCCGCAGGGCCTTTTCCACAGGATC 1551060
Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499
|| || | || | || | | |||||| || | ||||| || | || |
Sbjct 1551061 CAGGGTACCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGT 1551120
Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559
| |||||||| || | ||| | |||||||||||||| | || || || ||
Sbjct 1551121 GTAGAAGTCAATGCCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTAGAAGA 1551180
Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619
| || | || || ||||||||||| || | || ||||| | || ||| || ||
Sbjct 1551181 GAGGGTACGCTTTGCACGTTCACATGCAGTGCGCAGGCGACGAACTGCTCTCTTGTTCTC 1551240
Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679
| ||||||| || || || | || ||||||| || || || | | | | |
Sbjct 1551241 GCTGATATCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT 1551300
Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739
|||||||||||| ||||| || || ||||| || ||||| | ||| || ||||| || ||
Sbjct 1551301 ATCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATGCC 1551360
Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
|| || ||| | | |||||| |||||||| || ||||| || | |||||
Sbjct 1551361 ATCCTCGATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAA 1551411
Score = 109 bits (120), Expect = 2e-18
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | ||||| ||| | || || || ||||| ||||||| ||| | ||| |||
Sbjct 1552732 GCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGTGTATTCCAACATGGGAAG 1552673
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| ||||| || |||||| | || |||||| |||||||| || ||
Sbjct 1552672 GTGGAGATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCACA 1552613
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || ||| | ||||||||||| ||||||| || |||| ||| ||||||| ||
Sbjct 1552612 GACACAGAGAGGTTGATTGGTGATGCTGCAAAGAACCAAGTTGCAATGAATCCAACCAAC 1552553
Query 349379 ACGGTTTTTG 349388
|| || ||||
Sbjct 1552552 ACAGTCTTTG 1552543
Score = 104 bits (114), Expect = 7e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|||||| | ||||||||||||||||| ||||| ||||||| || ||||||||||||
Sbjct 1551673 GCTGTTGTCACTGTACCAGCCTATTTCAATGACTCCCAGCGCCAGGCTACAAAAGATGCT 1551614
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| | || || ||| | || || || |||| || || || || |||||||| || |||
Sbjct 1551613 GGAACTATCGCAGGGCTCAACGTACTCCGAATTATCAACGAGCCGACTGCTGCTGCTATT 1551554
Query 349730 GCATATGGGCTTGATAA 349746
|| ||||| || || ||
Sbjct 1551553 GCTTATGGTCTGGACAA 1551537
>seq551
Length=8489217
Score = 143 bits (158), Expect = 8e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || ||||| ||||| || || || || || || || || || |||||||||
Sbjct 2123765 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 2123824
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| ||||||||||| ||||| || |||
Sbjct 2123825 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2123884
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || ||||| | ||| || ||||| || || || | |||
Sbjct 2123885 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2123944
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2123945 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2123976
Score = 140 bits (154), Expect = 1e-27
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || ||||| ||||| || || || || || || || | || |||||||||
Sbjct 2123309 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 2123368
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| ||||||||||| ||||| || |||
Sbjct 2123369 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2123428
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || ||||| | ||| || ||||| || || || | |||
Sbjct 2123429 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2123488
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2123489 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2123520
Score = 132 bits (146), Expect = 1e-25
Identities = 155/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || ||||| ||||| || || || || || || || | || ||||||||||| |
Sbjct 2123542 CAAG-TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCA 2123600
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || ||||||||||| || | ||||| ||||||||||| ||||| || ||||| |
Sbjct 2123601 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGA 2123660
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || || || || || ||||| | ||| || ||||| || || || | ||||| |
Sbjct 2123661 TCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGC 2123720
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || || || || ||||| ||||||||
Sbjct 2123721 CAGTCAGGGTCTTCACAAAGATCTGCAT 2123748
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|||||| || ||||| ||||| || || || || || || || | || |||||||||
Sbjct 2123993 AGAACATTGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 2124052
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| ||||||||||| ||||| || |||
Sbjct 2124053 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2124112
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || ||||| | ||| || ||||| || || || | |||
Sbjct 2124113 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2124172
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || | || || ||||| |||||||||
Sbjct 2124173 TTCCCTGTCAAGGTCTTCACAAAGATCTGCATT 2124205
>seq1011
Length=3435084
Score = 134 bits (148), Expect = 4e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || || || ||||| || || || || || ||||| | || |||||||||
Sbjct 2733949 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734008
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| || || ||||| ||||| || |||
Sbjct 2734009 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734068
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 2734069 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734128
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2734129 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734160
Score = 134 bits (148), Expect = 4e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || || || ||||| || || || || || ||||| | || |||||||||
Sbjct 2734177 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734236
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| || || ||||| ||||| || |||
Sbjct 2734237 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734296
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 2734297 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734356
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2734357 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734388
Score = 134 bits (148), Expect = 4e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || || || ||||| || || || || || ||||| | || |||||||||
Sbjct 2734405 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734464
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| || || ||||| ||||| || |||
Sbjct 2734465 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734524
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 2734525 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734584
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2734585 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734616
Score = 134 bits (148), Expect = 4e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| ||||| || || || ||||| || || || || || ||||| | || |||||||||
Sbjct 2734633 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 2734692
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || | ||||| || || ||||| ||||| || |||
Sbjct 2734693 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 2734752
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || ||||| ||||| | ||| || ||||| || || || | |||
Sbjct 2734753 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2734812
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||| ||||||||
Sbjct 2734813 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 2734844
>seq1400
Length=991305
Score = 114 bits (126), Expect = 4e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309
|||| |||||||| |||||||| || |||||||||||||| ||||| |||||| |
Sbjct 231848 CAGCCTGAACAGCAGCACCATAGGCTACAGCTTCATCTGGATTAATGCCACGAGAAGGCT 231907
Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369
| |||||||| || |||||| || | ||| || ||||| || || | ||| || ||||
Sbjct 231908 CCTTGCCATTGAAGAATTCTTTAACAAGTTGCTGTATTTTGGGGATGCGAGTAGAGCCAC 231967
Query 183370 CGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTT 183429
| || | |||| ||||| |||| ||| | | | ||||||| | |||||| |
Sbjct 231968 CAACAAGAACTATCTCATCAATATCGGATTTCTTTAGGTCAGAATCTTCCAGAACTTTCT 232027
Query 183430 CAACAGGGTCCATAGT 183445
|||||| | ||||||
Sbjct 232028 GAACAGGCTTCATAGT 232043
Score = 109 bits (120), Expect = 2e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236
|||||||| ||||| | |||||||| ||||| || || || ||| | || || | |
Sbjct 231989 ATTGATGAGATAGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTTGTT 231930
Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296
|| || || |||||||| || |||||| | |||||||||||||||||||| ||
Sbjct 231929 AAAGAATTCTTCAATGGCAAGGAGCCTTCTCGTGGCATTAATCCAGATGAAGCTGTAGCC 231870
Query 350297 TATGGTGCTGCTGTTCAGGC 350316
||||||||||||||||||||
Sbjct 231869 TATGGTGCTGCTGTTCAGGC 231850
Score = 102 bits (112), Expect = 2e-16
Identities = 132/180 (73%), Gaps = 3/180 (2%)
Strand=Plus/Minus
Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774
|| ||||| || ||||| ||||| | || || | ||| | | |||| || ||| |||
Sbjct 232765 ACAGCTGCTGCCATTGCTTATGGATTGGACAAGA-GAGAGGGCGAGAAGAA--TATCCTT 232709
Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834
| ||||| || |||||||| ||||||||||| || || || ||| |||| | ||| |
Sbjct 232708 GTATTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 232649
Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894
||||||||| || ||| ||| || || || || ||||| ||||| |||||| | |||
Sbjct 232648 TTTGAAGTTGTGGCTACTAATGGAGACACCCACCTGGGTGGGGAAGACTTTGATCAACGT 232589
Score = 96.9 bits (106), Expect = 1e-14
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667
|||||||| |||| || |||||||| || |||||||| |||||| || ||||||||||
Sbjct 232950 ATGCTGTTGTTACAGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACAAAAGATG 232891
Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACC 349713
|||| | ||||| || || ||||| | ||||| |||||||| ||
Sbjct 232890 CTGGTACTATTGCTGGATTGAATGTGATGAGAATTATTAATGAGCC 232845
>seq712
Length=9974483
Score = 93.3 bits (102), Expect = 1e-13
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607
||||||||||||| || ||||| | ||| || |||||||| | ||| || |||||||| |
Sbjct 8741421 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAATTGCTTACCAGCAAAAA 8741480
Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636
| || || |||||||| ||||||||||||
Sbjct 8741481 TCAGTCGCTGCTGATCGGGAGGAATTCCT 8741509
>seq1573
Length=591436
Score = 84.2 bits (92), Expect = 7e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781
|||||||||| || | |||||| ||||| || | |||||||||||| ||||| || |
Sbjct 537420 CCTCATCTCTGCTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 537479
Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841
||| |||||| |||| ||| | || ||||| || || ||||| || ||||| |
Sbjct 537480 TCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 537539
Query 223842 CTACTA 223847
||||||
Sbjct 537540 CTACTA 537545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515120150827745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |