Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq562 82.4 7e-11
>seq562
Length=6874971
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
|||| || ||||| | ||| |||||||| ||||| || | ||||| || || || |
Sbjct 2705111 CCAAAGAACTCTCTGCAAAGGGCGTGAAGATTTGGGATGCCAATGGGTCACGTGAGTTCC 2705170
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
|||| |||| ||| ||| | || ||||| || ||||| || | || || ||||
Sbjct 2705171 TGGATAAGCAGGGTTTCTGCAAAAGAGAAGAGGGGGATTTGGGACCTATTTATGGTTTCC 2705230
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||| ||||||||||| || ||
Sbjct 2705231 AGTGGAGGCACTTTGGGGCAGAATA 2705255
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || ||||||||||| ||||||||||| || || | || ||||| || ||||| ||
Sbjct 2705255 TATTCTGCCCCAAAGTGCCTCCACTGGAAACCATAAATAGGTCCCAAATCCCCCTCTTCT 2705196
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| ||| ||| |||| ||||| || || || ||||| | || ||||| ||||||
Sbjct 2705195 CTTTTGCAGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATCCCAAATCTTC 2705136
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
|| ||| | ||||| || ||||
Sbjct 2705135 ACGCCCTTTGCAGAGAGTTCTTTGG 2705111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448223653318800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |