Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq562 129 5e-25
>seq562
Length=6874971
Score = 129 bits (142), Expect = 5e-25
Identities = 128/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772
|||||| ||||| || || |||||||| ||||| || || |||||||| || || |||||
Sbjct 2708904 TAGCCCTGTGACATGGGCAATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAGGG 2708845
Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832
||| || || ||||| || || |||||||||||||| ||||| || | || || |
Sbjct 2708844 CACTCCTAGTCCCATATCTCCAGACCTCTGGTAGAGTTGGCAAGATAATTCACCATTTAG 2708785
Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
||||| |||||||| | |||||||| ||||| | ||||| |||
Sbjct 2708784 AACGTAGAACTGACAAAGAGCATGGCATGGAGGCAAAGCCATCAGA 2708739
Score = 87.8 bits (96), Expect = 1e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||||||||||||| || || | ||||||| || |||||||| || | |||
Sbjct 2705243 AAGTGCCTCCACTGGAAACCATAAATAGGTCCCAAATCCCCCTCTTCTCTTTTGCAGAAA 2705184
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||| |||| || || | || || ||||| ||||| ||||| || ||||| |
Sbjct 2705183 CCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATCCCAAATCTTCACGCCCTTTGCA 2705124
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
||||| ||||||| ||||| || ||
Sbjct 2705123 GAGAGTTCTTTGGCATTTGTAGAACC 2705098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406128969961690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |