Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Struthio_20camelus_20australis_20[refseq_20GCF_5F000698965.1_202014-
06-06] 6,915 sequences; 1,225,041,896 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq551 152 4e-32
seq1011 136 3e-27
>seq551
Length=8489217
Score = 152 bits (168), Expect = 4e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||| ||| || ||| |||||| ||||||||||| ||
Sbjct 2123518 CATGCCACCCCTCAGGCGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC 2123577
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || |||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 2123578 GGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 2123637
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| |||| | |||| | |||||||| || |
Sbjct 2123638 AGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCACTGGGCT 2123696
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2123697 CAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2123749
Score = 150 bits (166), Expect = 1e-31
Identities = 177/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 2123746 CATGCCACCCCTCAGGCGCAGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC 2123805
Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
|| | || | |||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 2123806 GGACAAGGT-GCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAG 2123864
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284
||| | |||||||| ||| ||||| |||| | |||| | |||||||| ||
Sbjct 2123865 GAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCACTGGGC 2123923
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2123924 TCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2123977
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||| ||||| || ||| |||||| ||||||||||| ||||
Sbjct 2123294 CCACCCCTCAGGCGCAGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2123353
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| | || ||||||||||| || |||||||||| | |||||| || | |||
Sbjct 2123354 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 2123413
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| |||||||| ||| ||||| |||| | |||| | |||||||| || || ||
Sbjct 2123414 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCACTGGGCTCAAC 2123472
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2123473 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2123521
Score = 129 bits (142), Expect = 4e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193
||| || ||| |||||| ||||||||||| |||| || |||| | || ||||||||
Sbjct 2124001 GTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTG 2124060
Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253
||| || |||||||||| | |||||| || | ||| | |||||||| ||| |||||
Sbjct 2124061 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 2124120
Query 44254 CTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312
|||| | |||| | |||||||| || || ||||||| || || ||||| || |
Sbjct 2124121 GGCCTTC-ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTG 2124179
Query 44313 TGAGGGTCTTCACGAAGATTTGCAT 44337
| | ||||||||| ||||| |||||
Sbjct 2124180 TCAAGGTCTTCACAAAGATCTGCAT 2124204
>seq1011
Length=3435084
Score = 136 bits (150), Expect = 3e-27
Identities = 171/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 2734614 CATGCCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 2734673
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 2734674 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGG 2734733
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | |||||||| || ||
Sbjct 2734734 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTC 2734793
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||||| || || ||||| || || ||||||||||| ||||| |||||| ||
Sbjct 2734794 AACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTG 2734848
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 2734158 CATGCCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 2734217
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 2734218 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGG 2734277
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | |||||||| || ||
Sbjct 2734278 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTC 2734337
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2734338 AACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2734389
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 2734386 CATGCCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 2734445
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || ||||||||||| || |||||||||| | |||||| || |
Sbjct 2734446 AGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGG 2734505
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | |||||||| || ||
Sbjct 2734506 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTC 2734565
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2734566 AACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2734617
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||| ||||| || ||| |||||| ||||||||||| || |
Sbjct 2733934 CCACCCCTCAGGCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 2733993
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| | || ||||||||||| || |||||||||| | |||||| || | ||
Sbjct 2733994 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 2734053
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||| | | | |||||||| || || |||
Sbjct 2734054 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 2734113
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 2734114 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 2734161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359960061246555
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