Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq38 100 3e-16 >seq38 Length=5833172 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||| ||||| | || |||||||||||||| |||||||| Sbjct 4395915 AGCCCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTAAAAGGC 4395974 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC 20349 ||||| | ||||||||||| ||||||||||| || || || || | ||||| Sbjct 4395975 ACTCCTAGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACC 4396027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441359773985240