Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq203 84.2 2e-11 >seq203 Length=1718561 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/128 (75%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 146449 GACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTACCA 146508 |||||||||||| || || ||| | |||||||||||||| || || | | ||| | | Sbjct 718911 GACCATCATTAACTTGGCTCAGAACTTTGTGGGCAGCAACAACCTCAACTTGCTCCAGCC 718852 Query 146509 GAT-GGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATAT 146567 || || || || || |||||| || | |||||||| ||| |||| || || |||| || Sbjct 718851 CATCGGTCAGTTTGGCACAAGGCTGCACGGAGGGAAAGACTCTGCCAGCCCTCGATACAT 718792 Query 146568 TTTCACCA 146575 ||||||| Sbjct 718791 CTTCACCA 718784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521530207885480