Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sturnus_20vulgaris_20[refseq_20GCF_5F001447265.1_202015-11-20] 2,361 sequences; 1,036,755,994 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq240 113 4e-20 >seq240 Length=1350550 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || ||||| ||||| || || Sbjct 1128378 ATGCAGATCTTTGTCAAGACGCTGACTGGCAAGACCATCACTCTGGAAGTCGAGCCCAGT 1128437 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || |||||||| || ||||| || || || || Sbjct 1128438 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 1128497 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || |||||||| |||| || | ||| | || || |||||| Sbjct 1128498 CAGAGGTTGATCTTTGCTGGCAAACAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 1128557 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 1128558 ATCCAGAAGGAGTCGAC 1128574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434905564470720