Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq1684 764 0.0 seq242 443 6e-120 seq21697 376 8e-100 seq24970 360 6e-95 seq458 331 3e-86 seq1 329 1e-85 seq1324 260 4e-65 seq1292 242 1e-59 seq28658 199 1e-46 seq676 188 2e-43 seq1037 149 2e-31 seq818 147 7e-31 seq36428 120 9e-23 >seq1684 Length=72861351 Score = 764 bits (846), Expect = 0.0 Identities = 559/638 (88%), Gaps = 10/638 (2%) Strand=Plus/Minus Query 24871 GCTCACGaa--aaaaaaTGTCCTTGTCG-ATATAGGGATGAATCGCTTGGT-GTACCTCA 24926 |||| |||| |||||| ||| | |||| || ||||||| | || |||| |||| ||| Sbjct 62225773 GCTCGCGAAGAAAAAAAAGTCGTAGTCGCATGAGGGGATGAGTTGCATGGTTGTACTTCA 62225714 Query 24927 TCTACTGCGAAAACTTGACCTTTCTCTCCCATATTGCAGTCGCGGCACGATGGAACTAAA 24986 | || |||| || || ||| ||| |||||||| | ||||||||||| || || || |||| Sbjct 62225713 TATATTGCGGAATCTGGACTTTTTTCTCCCATCTGGCAGTCGCGGCTCGTTGTAA-TAAA 62225655 Query 24987 TTAATAGGCATCACCGAAAATTCAGGATAATGTGCAATAGGAAGAAAATGATCTATATTT 25046 ||| ||||| || |||||||||||||||| |||| ||||||||||| ||||||| || Sbjct 62225654 TTAGTAGGCGTCTT-GAAAATTCAGGATAATATGCATTAGGAAGAAAAGGATCTAT-TTA 62225597 Query 25047 TTTGTCTGTCCTATATCACCACAAAATGGACATTTTTCACCTGATGAAACAAGCATGTCA 25106 |||||||||| ||||||||||||| | ||||| ||||||| ||||||||||||| |||| Sbjct 62225596 TTTGTCTGTCATATATCACCACAACAGGGACACTTTTCACTCGATGAAACAAGCACGTCA 62225537 Query 25107 TC-GTAATATGTTCTAGCGGGTTTGTTTTTATCTCGGAGATTATTTTCATAAAGCTTTTC 25165 || |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 62225536 TCAGTAATATGTTCTAGCGGGCTTGTTTTTATCTCGGAGATTAGTTTCATAAAGCTTTCA 62225477 Query 25166 TAATTTAACCTTTGTCAGGTTACCAACTACTAAGGTTGTAGGCTCAAGAGGGTGTGTCCT 25225 ||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 62225476 TAATTTATCCACTGTCAGGTT-CCACCTACTAAGGTTGTAGGCTCAAGAGGGTGTGTCCT 62225418 Query 25226 GTCGTAGGTAAATAACTGACCTGTCGAGCTTAATATTCTATATTGTTGTTCTTTCTGCAA 25285 ||||||||||||||| ||||| ||||||| ||||||| ||||| | |||||||| ||||| Sbjct 62225417 GTCGTAGGTAAATAAATGACCGGTCGAGCATAATATTTTATATAGATGTTCTTTATGCAA 62225358 Query 25286 AAAAGTGGGGAAGTGAGTAATGAAATTATTTCTAACATTTATCTGCATCATACCTTCCGA 25345 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 62225357 AAAAGTGGGGAAGTGAGTAATGAAAATATTTCTAACATTGATCTGCATCATACCTTCCGA 62225298 Query 25346 GCATTTATTAAGCATTTCGCTATAAGTTCTCGCTGGAAGAGGTAGTTTTTTCATTGTACT 25405 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 62225297 GCATTTATTAAGCATTTCGTTATAAGTTCTCGCTGGAAGAGGTAGTTTTTTCATTGTACA 62225238 Query 25406 TTACCTTCATCTCTGTTCATTATCATCGCTTTTAAAACGGTTCGACCTTCTAATCCTATC 25465 |||| ||||||||| ||||||||||||||||| ||||||||||| |||| |||| | | Sbjct 62225237 TTACTTTCATCTCTCTTCATTATCATCGCTTTCAAAACGGTTCGCCCTTATAAT-CACTG 62225179 Query 25466 TGACCATTATAATTTTTTAGAATGGTTTCATAAGAAAG 25503 ||||||||||||| ||||||||| ||||||| ||||| Sbjct 62225178 TGACCATTATAATACTTTAGAATGTTTTCATAGGAAAG 62225141 Score = 98.7 bits (108), Expect = 3e-16 Identities = 136/180 (76%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 21193 TGCAGATGTTCTTGAATACCTTGGGGCCGGTGAGAATTCGGCCTTTCCGGCAGGTGCGCC 21252 |||| |||| || ||||||| || | | || ||| || ||| || || |||||| | Sbjct 60935151 TGCATATGTACTAGAATACCGTGTTTTCTGCGACAATCCGTGCTTACCCGCTGGTGCGTC 60935092 Query 21253 GATCCCGTGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGGCAGGCGTT 21312 || || |||||| ||| || ||||||||||| ||||||||||||| | || ||| | | Sbjct 60935091 CATGGCG-GGCCATAAGAAATGGTTCCGTCTGGATACGTCCTGATGC-GCGGGAGG-GCT 60935035 Query 21313 TGACAAATCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCTTCCTGATAT 21372 |||| ||||| |||| || | |||| |||| | || |||||||||||| | ||||||| Sbjct 60935034 TGAC-AATCA-CCTAACC-TACCTTGTTGTC-CCTAATCATCGGGTGTGC-TACTGATAT 60934980 >seq242 Length=156412533 Score = 443 bits (490), Expect = 6e-120 Identities = 334/389 (86%), Gaps = 3/389 (1%) Strand=Plus/Minus Query 31687 GGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGCCGGAAGT 31746 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 113594108 GGTACGCATACTATCATCGCGATAGATGATCGGGGATTCAGTAACATGCACGCCGGAAGT 113594049 Query 31747 GAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCAGTGCTTTAGC 31806 |||||| ||||||||| || |||||||| ||||||| ||| ||| |||||| ||||| Sbjct 113594048 GAATTCTAACAGGGTTAAGGAGTCGTTCTAGTACTGTATTCTGCAGCCCAGTGGCTTAGC 113593989 Query 31807 GTTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCAAGCAGGGTGTGGAAGTAGGACAT 31866 ||| | ||||||| |||||||| || ||| |||||||||||||||||||||||||||| Sbjct 113593988 GTT-AGATCCGGAGTCACACCGGCGCTAACGTCAGCAAGCAGGGTGTGGAAGTAGGACA- 113593931 Query 31867 TTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGTGAACTTCTGA 31926 ||||||||||| ||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct 113593930 TTTCATGTCAGTCCAGTTCTTTCCGGAGCGGGGCGTTCATATCACGTTGTGAATCTCTGA 113593871 Query 31927 AGCGGTGATGAC-GCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTTCGACAGCTC 31985 |||| |||| || ||||||||||||| |||||||||||||||| ||||||||||||| Sbjct 113593870 AGCGTTGATCACATACGAGCCGTAATTTATGCCACGCATCATCCCGCTGTTCGACAGCTG 113593811 Query 31986 TCACATCGATCCCGGTACGCTGCAGGATAATGTCCGGTGTCATGCTGCCACCTTCTGCTC 32045 |||||||||||| ||||| ||| ||| ||||| || |||||| |||||| |||||| Sbjct 113593810 TCACATCGATCCTCGTACGTAGCATGATCATGTCTGGAGTCATGATGCCACGATCTGCTA 113593751 Query 32046 TGCGGCTTTCTGTTTCAGGAATCCAAGAG 32074 | | | || ||||||||||||||||||| Sbjct 113593750 TATGCCGTTTTGTTTCAGGAATCCAAGAG 113593722 Score = 98.7 bits (108), Expect = 3e-16 Identities = 72/81 (89%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 25041 ATATTTTTTGTCTGTCCTATATCACCACAAAATGGACATTTTTCACCTGATGAAACAAGC 25100 |||||||||||| ||||||||||| |||| | ||||| ||||||||||||||||| || Sbjct 145488531 ATATTTTTTGTCAGTCCTATATCAGCACAGA-TGGAC-TTTTTCACCTGATGAAATCAGA 145488474 Query 25101 ATGTCATCGTAATATGTTCTA 25121 |||| |||||||||||||||| Sbjct 145488473 ATGTTATCGTAATATGTTCTA 145488453 >seq21697 Length=2064 Score = 376 bits (416), Expect = 8e-100 Identities = 340/416 (82%), Gaps = 9/416 (2%) Strand=Plus/Minus Query 25207 GCTCAAGAGGGTGTGTCCTGTCGTAGGT-AAATAACTGA-CCTGT-CGAGCTTAATATTC 25263 |||||||||| || ||||| |||||||| |||| | ||| || || | ||| || ||| | Sbjct 2064 GCTCAAGAGG-TGGGTCCTATCGTAGGTGAAATCAATGAACCAGTACCAGCATACTATGC 2006 Query 25264 TATATTGTTGTTCTTTCTGCAAAAAAGTGGGGAAGTGAGTAATGAAATTATTTCTAACAT 25323 ||| | || |||||| |||| |||| || || |||||||||| | ||||||| ||| Sbjct 2005 ATTAT-GCTGCTCTTTCGATAAAATAGTGAGGCAGGGAGTAATGAAGT-ATTTCTATCAT 1948 Query 25324 TTATCTGCATCATACCTTCCGAGCATTTATTAAGCATTTCGCTATAAGTTCTCGCTGGAA 25383 | |||||||||||| || ||||||| ||||| ||||| |||||||||||||| ||| | Sbjct 1947 TAGTCTGCATCATACATTACGAGCATA-ATTAATCATTTGGCTATAAGTTCTCGATGGTA 1889 Query 25384 GAGGTAGTTTTTTCATTGTACTTTACCTTCATCTCTGTTCATTATCATCGCTTTTAAAAC 25443 ||||||||||||||||||||| |||||||||| |||||||| |||||||| | ||||| Sbjct 1888 GAGGTAGTTTTTTCATTGTACGC-ACCTTCATCTGTGTTCATTGTCATCGCTCTGAAAAC 1830 Query 25444 GGTTCGACCTTCTAATCCTATCTGACCATTATAATTTTTTAGAATGGTTTCATAAGAAAG 25503 | || || || || |||||||||||| ||||||||||| || |||||||||| |||||| Sbjct 1829 GCTTTCACGTTTTAGTCCTATCTGACCGTTATAATTTTTGAGCATGGTTTCATCAGAAAG 1770 Query 25504 CTCTGAATCAACGGACTGCGATAATAAGTGGTGGTATCCAGAATTTGTCA-CTTCAAGTA 25562 || |||||||||||| ||||||||| ||| ||||||||||||||||| |||||| Sbjct 1769 CTGTGAATCAACGGAGCGCGATAATACTCGGTTGTATCCAGAATTTGTCAGGGGCAAGTA 1710 Query 25563 AAAACACCTCACGAGTTAAAACACCTAAGTTCTCACCGAATGTCTCAATATCCGGA 25618 |||| | | ||| |||||||| |||| |||| ||||||||||||||||||||| Sbjct 1709 AAAAAAAAAAAAGAGCTAAAACACTTAAGCTCTCGCCGAATGTCTCAATATCCGGA 1654 >seq24970 Length=6292 Score = 360 bits (398), Expect = 6e-95 Identities = 291/344 (85%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 34881 AGTGAGTTGATTGAGCTTGGTGTGTTGAACAAAACTTTTTCCCGATGGAATGGAAAGCAT 34940 ||||| ||| || ||||| | | |||| ||||| || ||| |||| || | || Sbjct 4992 AGTGACGTGACTGCGCTTGCCGCGCCGAACGGCACTTTCACCGGATAAAATGCAAGGTAT 4933 Query 34941 ATATTATTCCCTATTGAGGATATTTACTGGACTGAATTAGTTGCCAGCTATGATCCATAT 35000 |||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||| Sbjct 4932 ATATCATTCCCTATTGACGATATTTACTGGACTGACTTAGTTGCCACCTATGATCCATAC 4873 Query 35001 AATATTGAGATAAAGCCAAGGCCAATATCTAAGTAACTAGATAAGAG-GAATCGATTTTC 35059 ||||||||||||||| | ||||||||||||||| ||||| ||||||| ||||| |||||| Sbjct 4872 AATATTGAGATAAAGTCTAGGCCAATATCTAAG-AACTAAATAAGAGAGAATCTATTTTC 4814 Query 35060 CCTTAATTTTCTGGCGTCCACTGCATGTTATGCCGCGTTCGCCAGGCTTGCTGTACCATG 35119 ||||||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||| Sbjct 4813 GCTTAATTTTCTGGCGTCCAATGCAAGTTATGCCGCGTTCGTCAGGCTTGCAGTACCATG 4754 Query 35120 TGCGCTGATTC-TTGCGCTCAATACGTTGCAGGTTGCTTTCAATCTGTTTGTGGTATTCA 35178 ||||||||||| ||||||| |||| |||| |||| |||| |||||||||| | |||| Sbjct 4753 TGCGCTGATTCTTTGCGCTATATACACTGCAAGTTGTTTTC-ATCTGTTTGTTGGATTCT 4695 Query 35179 GCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCG 35222 |||||| |||||| |||||| |||||||||||| ||| ||||| Sbjct 4694 GCCAGCCCTGTAA-GTCTATTCGATTTAGTGCGC-TTCCACTCG 4653 >seq458 Length=112617285 Score = 331 bits (366), Expect = 3e-86 Identities = 340/424 (80%), Gaps = 18/424 (4%) Strand=Plus/Minus Query 38046 ACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGA 38105 |||||||| |||||||| || |||||| || |||||| ||| | | | ||| |||| | Sbjct 44870341 ACAACGCAATACCCTGAA-GAAAATGCAAGGCTCTTTGGTCAATCTAGG-CAGTTAAACA 44870284 Query 38106 TCTCGGCGTATATCAAAGCGCGATCAACAAGGCCATTCATGCAGGCCGAAAGAttttttt 38165 ||||| |||||| ||||||||| |||| ||||||||||||||||| |||| |||| Sbjct 44870283 -CTCGGGCAATATCACAGCGCGATCTTAAAGGTCATTCATGCAGGCCGAATGATTGTTTT 44870225 Query 38166 AACTATAAACGCTGATGGAAGCGTTTATGCGGAAGAGGTAAAGCCCTTCCCGAGTAACaa 38225 |||||| |||||||| | ||| ||||||||| || |||||| | ||||||| || | Sbjct 44870224 -ACTATAGGCGCTGATGCAGGCGGTTATGCGGAGGACGTAAAGTCATTCCCGACTA--CA 44870168 Query 38226 aaaaaCAACAGCATAAATAACCCCGCTCTTACACATTCCAGCCCTGAAAAAGGGCATCAA 38285 | |||| ||||||| |||||||||||||||| |||||||| ||| || |||||||||| Sbjct 44870167 ACAAACTACAGCAT-AATAACCCCGCTCTTA-ACATTCCACCCCAGATAAAGGGCATC-T 44870111 Query 38286 ATTAAACCACACCTATGGTGTATGCATTTATTTGCATACATTCAATCAATTGTTATCTAA 38345 |||| || ||||||| || | ||||||||||||||||| |||| ||| | || |||| || Sbjct 44870110 ATTATACTACACCTA-GGGGCATGCATTTATTTGCATATATTC-ATCGAGTGCTATCGAA 44870053 Query 38346 GGAAATACTTACATATGGTTCGTGCAAACAAACGCAACGAGGCTCTACGAATCGAGAGTG 38405 ||||||||||||| ||| |||| |||| |||||||||| ||||| | |||||| | || Sbjct 44870052 TGAAATACTTACATTAGGTGCGTGTAAAC-AACGCAACGATGCTCT-CAAATCGACA-TG 44869996 Query 38406 CGTTGCTTAACAAAATCGCAATGCTTGGAACTGAGAAGACAGCGGAAGCTGTGGGCGTTG 38465 ||| ||| || | ||| || ||||||||||||| ||||||||| || ||| ||| || Sbjct 44869995 CGTAGCTATAC-AGATC-CACTGCTTGGAACTGATAAGACAGCG--AGTCGTGTGCGATG 44869940 Query 38466 ATAA 38469 |||| Sbjct 44869939 ATAA 44869936 Score = 282 bits (312), Expect = 1e-71 Identities = 247/302 (82%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 14644 GCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGCCGCAATTTA 14703 ||| ||| |||||||| |||||||| | ||| |||||||| | ||||||| |||| Sbjct 2074787 GCCCGGCAATGTGCTGATGTGCTGTCTGCTCCCATGGGTGCCGAACCTCGCCGCATTTTA 2074728 Query 14704 CTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAGGTA 14763 ||||| | |||||||||||||||||||||||| ||| |||||||| || ||||| || || Sbjct 2074727 CTGCGACTACGGCGAGCTGCTGCACCATATTCATGAGCAACTGAGGAACCGAGACAGTTA 2074668 Query 14764 CACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCGCGCATC 14823 ||||||||||||| | |||| ||||| ||| ||||||| |||| ||| || |||| |||| Sbjct 2074667 CACCGACAAATGGGAACGACTCACACTCTCACTCTGGCCTCACAGGGGATTGCGCTCATC 2074608 Query 14824 TGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTGAAAACGGGG 14883 ||||||| | | || ||| | | |||||||| |||||||||||||| |||| ||||| | Sbjct 2074607 TGCCTTTGCTGCGA-TTAAATCAATTTGGTCACCGCATCGACCTTCATGTG-AAACGTGT 2074550 Query 14884 GCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGT-TTCGTCAGAAACTGAGCGA 14942 | ||||| ||| |||||||| ||||| ||||| ||||| | ||| || |||| ||||||| Sbjct 2074549 GATGAAGACATGCGGGCACT-GCCACTCAGCTACCGGCTTATTCATCTGAAAATGAGCGA 2074491 Query 14943 CG 14944 || Sbjct 2074490 CG 2074489 Score = 214 bits (236), Expect = 6e-51 Identities = 150/167 (90%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 7985 AAAAGGTCTTGAGCAGGCCGTTGAAAACCTCAGCCGTATCAGCAAAACGGCGGTGCCTGG 8044 ||||| ||| ||||||| |||||| ||||||| |||||||||||| ||||| ||||||| Sbjct 103855016 AAAAGATCT-GAGCAGGTCGTTGAGAACCTCATGCGTATCAGCAAATCGGCGCTGCCTGG 103855074 Query 8045 TGCCGCCGCAA-TGGCCATTAACCGCGTTGCTTCATCC-GCGATATCGCAGTCGGCGTCA 8102 ||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||| Sbjct 103855075 TGCCGCCGCAAATGGCCATTAATCGCGTTGCTTCAGGCTGCGATATCGCAGTCGGCGTCA 103855134 Query 8103 CAGGTTGCCCGTGAGACAAAGGTACGCCGGAAACTGGTAAAGGAAAG 8149 ||| | || |||||||||||||||||||||| ||||||||||||||| Sbjct 103855135 CAGTTGGCTCGTGAGACAAAGGTACGCCGGAGACTGGTAAAGGAAAG 103855181 Score = 105 bits (116), Expect = 2e-18 Identities = 187/266 (70%), Gaps = 5/266 (2%) Strand=Plus/Minus Query 36406 CTTTTTCTGATAGATAATGTTCTGTTAAAATATCTCCGGCCTCATCTTTTGCCCGCAGGC 36465 || ||||| | ||| | ||||||||| | ||||||| || | ||||||||| | | Sbjct 53613367 CTGTTTCTCACTGATTAGGTTCTGTTACA-TATCTCCAGCTGCCTCTTTTGCCGGAGCGT 53613309 Query 36466 TAATGTCTGAAAATTGAGGTGACGGGTTAAAAATAATATCCTTGGCAACCTTT-TTTATA 36524 | |||| ||||| || ||| | | |||| ||||| |||||||| ||| | Sbjct 53613308 TCATGTACGAAAAACGACTTGATCGCCGCCTAGGAATACCCTTGCCAACCTTTATTTCTG 53613249 Query 36525 TCCCTTTTAAATTTTGGCTTAATGACTATATCCAATGAGTCAAAAAGCTCCCCTTCAATA 36584 ||||| | | |||||| | | ||| || ||||||| | |||||| |||||| Sbjct 53613248 TCCCTCTCATGCCTTGGCTGAGAGGCTACTCCCTGTGAGTCATAT-GCTCCCATTCAATG 53613190 Query 36585 TCTGTTGCCCCTAAGACCTTTAATATATCGCCAAATACAGGTAGCTTGGC-TTCTACCTT 36643 ||| | ||| || | || ||| |||||||||||| ||| || ||||| |||||| | Sbjct 53613189 GTTGTAGGCCCAAATATCTCTAAAATATCGCCAAATGGAGG-AGATTGGCCTTCTACATA 53613131 Query 36644 CACCGTTGTTCGGCCGATGAAATGCA 36669 | ||||||||| |||||||||||| Sbjct 53613130 CTACGTTGTTCGATCGATGAAATGCA 53613105 Score = 95.1 bits (104), Expect = 4e-15 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 26981 CCCTTAATTTTATTAAAATAACC-GCAATTTATTTGGCGGCAACACAGGATCTCTC-TTT 27038 |||||| ||| || ||||||||| |||| |||||||||||||| ||||||||||| ||| Sbjct 105807443 CCCTTATTTTAATAAAAATAACCCGCAAGATATTTGGCGGCAACGCAGGATCTCTCTTTT 105807384 Query 27039 TAAGTTACTCTCTATT 27054 |||||||||||||||| Sbjct 105807383 TAAGTTACTCTCTATT 105807368 >seq1 Length=118548696 Score = 329 bits (364), Expect = 1e-85 Identities = 435/589 (74%), Gaps = 11/589 (2%) Strand=Plus/Minus Query 26004 CCATATTTGAAAAGTTT-TCATCACTACTTAGTTTTTTGATAGCTTCAAGCCAGAGTTGT 26062 ||||| | ||| || || ||||| ||| |||||| ||||| || | ||| ||||| ||| Sbjct 21777796 CCATAATCGAACAGGTTGTCATCGCTAATTAGTTCTTTGAGAGAT-CAACCCAGACGTGT 21777738 Query 26063 CTTTTTCTATCTACTCTCATACAACCAATAAATGCTGAAATGAATTCTAAGCGGAGATC- 26121 | || | | | ||||||||| ||| | |||||||| | | |||| || ||| ||||| Sbjct 21777737 CCTTGTGTGT-TACTCTCATTCAAGCCATAAATGCC-AGAGGAATGCTGAGCAGAGATGA 21777680 Query 26122 GCCTAGTGATTTTAAACTATTGCTGGCAGCATTCTTGAGTCCAATATAAAAGTATTGTGT 26181 || |||||||| || | |||||| ||| |||| |||||| || |||||| |||||||| Sbjct 21777679 GCTTAGTGATTCTATATTATTGCAGGCTGCATCATTGAGTTCAGTATAAATGTATTGTG- 21777621 Query 26182 ACCTTTTGCTGGGTCAGGTTGTTCTTTAGGAGGAGTAAAAGGATCAAATGCACTAAACGA 26241 || | || |||| |||| || ||| |||||| || ||||| | | ||| | | | Sbjct 21777620 ACGTCTT-CTGGCTCAGCATGGACTTCAGGAGGTTTATCAGGATGATACGCATTCACCTC 21777562 Query 26242 AACTGAAACAAGCGATCGAAAATATC-CCTTTGGGATTCTT-GACTCGATAAGTCTATTA 26299 |||||||||| || ||||||| | | ||| |||| || | |||||||||||| || Sbjct 21777561 AACTGAAACACGCCATCGAAAGTTTGGCCTCCGGGACTCCCAGGCTCGATAAGTCTCATA 21777502 Query 26300 TTTTCAGAGAAA-AAATATTCATTGTTTTCTGGGTTGGTGATTGCACCAATCATTCCATT 26358 |||||||| | |||||| |||| | | |||| |||||| |||||| |||||||||| Sbjct 21777501 GCTTCAGAGACATAAATATATATTGGTCTTTGGGCTGGTGACAGCACCATTCATTCCATT 21777442 Query 26359 CAAAATTGTTGTTTTACCACACCCATTCCGCCCGATAAAAGCATGAATGTTCGTGCTGGG 26418 ||||| | ||||||||||||||| | || |||||| ||| |||| |||||| || Sbjct 21777441 CAAAACAGGATTTTTACCACACCCATCACCCCGGATAAATGCAGGAATAGTCGTGCATGG 21777382 Query 26419 CATAGAATTAACCGTCACCTCAAAAGGTATAGTTAAATCACTGAATCCGGGAGCACTTTT 26478 | ||| || |||| ||||||||||||||| |||||||| || |||||||||| | Sbjct 21777381 CGCAGATAAAAACGTCTCCTCAAAAGGTATAGGTAAATCACCGAGTCCGGGAGCAGGTAG 21777322 Query 26479 TCTATTAAATGAAAAGTGGAAATCTGACAATTCTGGCAAACCATTTAACACACGTGCGAA 26538 || ||||||||||||| || | |||||||| |||| || || | | || | || Sbjct 21777321 CAATTTTAATGAAAAGTGGACAT-TAACAATTCTAGCAACCCCACTATCCCGCGAGAAAA 21777263 Query 26539 CTGTCCATGAATTTCTGAAAGAGTTACCCCTCTAAGTAATGAGGTGTTA 26587 |||||||| ||| | || ||||| | | ||||||| ||| |||| Sbjct 21777262 TCGTCCATGAGTTTATTAATGAGTTCATCGTTTAAGTAAGGAGCAGTTA 21777214 Score = 172 bits (190), Expect = 2e-38 Identities = 174/224 (78%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 22715 CAATTGCTTTTAAGACTGAACGCATGAAATATGGTTTTTCGTCATGTTTTGAGTCTGCTG 22774 |||| || |||| |||||||||||||| |||| ||||||||| |||| ||| |||||| Sbjct 28392850 CAATAGCAATTAACACTGAACGCATGAACTATGATTTTTCGTCGGGTTTAGAGACTGCTG 28392909 Query 22775 TTGATATTTCTAAAGTCGGttttttttCTTCGTTTTCTCTAACTATTTTCCATGAAATAC 22834 || ||| ||||||||| | ||||| || ||| |||| || ||||||| ||| |||| Sbjct 28392910 TTAATACCTCTAAAGTCTGCATTTTTACTCAGTTGTCTCAAAATATTTTCTGTGATATAC 28392969 Query 22835 ATTTTTGATTATTATTTGAATCAATTCCAATTACCTGAAGTCTTTCATCTATAATTGGCA 22894 ||||||| |||| |||||| ||||||||| ||||||| ||||||||| ||| | | Sbjct 28392970 CTTTTTGAATATTTTTTGAAGAAATTCCAATCACCTGAAATCTTTCATCCCTAAAAGATA 28393029 Query 22895 TTGTATGTATTGGTTTATTGGAGTAGATGCTTGCTTTTCTGAGC 22938 | | |||| || | |||| || || | |||||| || |||||| Sbjct 28393030 ATAT-TGTACTGATATATT-GAATAAAGGCTTGCCTTCCTGAGC 28393071 >seq1324 Length=11587733 Score = 260 bits (288), Expect = 4e-65 Identities = 246/310 (79%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 24839 AGTTCCGGAAACGAAA--TTTGCAT-ATACCCATTGCTCACGaaaaaaaaTGTCCTTGTC 24895 || ||| | ||||||| || |||| || ||| | |||||| | ||||||| |||| Sbjct 8590559 AGATCCCGGAACGAAAACTTCGCATTATTGGCATGACACACGAACACAAATGTCGCTGTC 8590500 Query 24896 GATATAGGGATGAATCGCTTGGTGTACCTCATCTACTGCGAAAACTTGACCTTTCTCTCC 24955 |||||||||| |||| |||||||||||||||| | |||||||||||||||| | ||| | Sbjct 8590499 GATATAGGGAGGAATAGCTTGGTGTACCTCATTTTTTGCGAAAACTTGACCTGT-TCTTC 8590441 Query 24956 CATATTGCAGTCGCGGCACGATGGAACTAAATTAATAGGCATCACCGAAAATTCAGGATA 25015 |||| ||||||| | ||||||| | | | ||||| | | || ||| || ||||| || Sbjct 8590440 CATAGCGCAGTCGAGACACGATGAATATTATTTAATTGACTACATCGATAAGTCAGGTTA 8590381 Query 25016 ATGTGCAATAGGAAGAAAATGATCTATATTTTTTGTCTGTCCTATATCACCACAAAATGG 25075 ||| |||||||| |||||||||| |||||||||||| ||| | |||| ||||||||||| Sbjct 8590380 ATGGGCAATAGGTAGAAAATGATTTATATTTTTTGTGAGTCGTTTATCCCCACAAAATGG 8590321 Query 25076 ACATTTTTCACCTGATGAAACAAGCATGTCATCGTAATATGTTCTAGCGGGTTTGTTTTT 25135 ||| |||||||| | | ||||| ||||||||| ||| || ||||| | | ||||||||| Sbjct 8590320 ACAATTTTCACCCGTGGTAACAATCATGTCATCATAAAATATTCTATCAGCTTTGTTTTT 8590261 Query 25136 ATCTCGGAGA 25145 |||| |||| Sbjct 8590260 ATCTGTGAGA 8590251 >seq1292 Length=11201131 Score = 242 bits (268), Expect = 1e-59 Identities = 206/251 (82%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 4617 ATGACGGACCACGACAGGCCCGCAGTTATCAGGTCATGAACGGCATCGCCGTGCTGCCGG 4676 |||||||||| ||| | || || | || || ||||| ||||||||||||||||||| Sbjct 616496 ATGACGGACCGCGATTTGGCCTGAGATTTCCTGTAATGAAGGGCATCGCCGTGCTGCCGG 616555 Query 4677 TGTCCGGCACGCTGGTCAGCCGGACGCGGGCGCTGCAGCCGTACTCGGGGATGACCGGTT 4736 ||||| | |||| ||||| |||||||| ||||||| |||||||| ||||| ||||||| Sbjct 616556 TGTCCAGGACGCGGGTCAACCGGACGCCTTCGCTGCAACCGTACTCTGGGATTACCGGTT 616615 Query 4737 ACAACGGCATTATCGCCCGTCTGCAACAGGCTGCCAGCGATCCGATGGTGGACGGCATTC 4796 || | ||||||||||||||||||||||||||||||||| ||||||||||||| |||| || Sbjct 616616 ACGATGGCATTATCGCCCGTCTGCAACAGGCTGCCAGCTATCCGATGGTGGAAGGCACTC 616675 Query 4797 TGCTCGATATGGACACGCCCGGCGGGATGGTGGCG-GGGGCATT-TGACTGCGCTGACAT 4854 ||| ||||||| || ||||||| | ||| ||| || |||| || ||| ||| |||| | Sbjct 616676 TGCACGATATGAACTCGCCCGGAGAGATCGTGCCGCAGGGCTTTCTGAATGCTCTGAACT 616735 Query 4855 CATCGCCCGTG 4865 |||| | |||| Sbjct 616736 CATCTCACGTG 616746 >seq28658 Length=3990 Score = 199 bits (220), Expect = 1e-46 Identities = 240/312 (77%), Gaps = 12/312 (4%) Strand=Plus/Minus Query 24962 GCAGTC-GCGGCACGATGGAACTAAATTAATAGGCATCACCGAAAATTCAGGATAATGTG 25020 |||||| ||||| |||| ||| | | ||| ||| ||||||||||| |||| ||| ||| Sbjct 2285 GCAGTCAGCGGCTCGATTGAAACTAGTAAATGGGCTTCACCGAAAATGCAGGTTAAGGTG 2226 Query 25021 CAATAGG-AAGAAAA-TGATCTATATTTTTTGTCTGTCCTATATCACCACAAA-ATGGAC 25077 ||||||| ||||||| | || | ||||||| |||| || |||||| |||||| | |||| Sbjct 2225 CAATAGGCAAGAAAAATCAT-TGTATTTTTAGTCTCTCATATATCGACACAAATAAGGAC 2167 Query 25078 ATTTTTCACCTGATGA-AACAAGCATGTCATCGTAATATGTTCTAGCGGGTTTGTTTTTA 25136 ||| |||| ||||| |||||||| |||| ||||||| ||| | ||| |||||| Sbjct 2166 ATTCATCACA-GATGATAACAAGCAC-TCATAGTAATATCCTCTGGGCGGTCA-TTTTTA 2110 Query 25137 TCTCGGAGATTATTTTCATAAAGCTTTTCTAATTTAACCTTTGTCAGGTTACCAACTACT 25196 | |||||||||||| ||||||| || |||| | ||| ||||||||| ||||||| | Sbjct 2109 TGGCGGAGATTATTT-CATAAAGGTTAA--AATTAAGCCTATGTCAGGTTTCCAACTAGT 2053 Query 25197 AAGGTTGTAGGCTCAAGAGGGTGTGTCCTGTCGTAGGTAAATAACTGACCTGTCGAGCTT 25256 ||||||||||| ||| ||||||| |||||||| | || ||| |||| |||||| Sbjct 2052 AAGGTTGTAGGTTCACGAGGGTGAGTCCTGTCTGAAAGAAGTAATGGACCCCATGAGCTT 1993 Query 25257 AATATTCTATAT 25268 ||||| |||| Sbjct 1992 CATATTAAATAT 1981 >seq676 Length=62374962 Score = 188 bits (208), Expect = 2e-43 Identities = 306/427 (72%), Gaps = 10/427 (2%) Strand=Plus/Minus Query 41222 GTCAGGGAAGTTG-TGAAGTTCTGGGATATACCGCTCACCGTATTGCAGGTTGATATCAA 41280 |||||||||| || | || ||| |||||||| |||||| |||| ||||||||| |||| Sbjct 27656095 GTCAGGGAAGGTGGTAAAATTC-GGGATATATT-CTCACCATATTTCAGGTTGATGTCAA 27656038 Query 41281 CCCGGAGCTTGGACAGCCAAATGGTTATACGGTATGGGAAC-CAAAGGATATTCAGACGC 41339 || || | || || | | | |||| ||| || || | || ||| | Sbjct 27656037 CCTGGGGTCGGGGCATTCTATTTTTTATGTCTTATCATAAATCATTGTTTACTCACAACG 27655978 Query 41340 GAATGCCTGTTCTGAAGCCATTTATCGATATGGTAAAGAAATATGGCACTCCATACGTCG 41399 |||| |||| | || |||| ||| ||| |||| ||||| || ||||||||| | Sbjct 27655977 AAATGGGTGTTGT-AATTCATTG-TCGTAATG-TAAATAAATAAA-CAATCCATACGTTG 27655922 Query 41400 GCGGCGCGTTCTGCACTGACAGATTAAAACTCGTTCCCTTCACCAAATACTG-TGATGAC 41458 | ||||||| |||| |||||||||||| |||||||| |||| | || ||| ||| || Sbjct 27655921 TCTGCGCGTTATGCAGTGACAGATTAAAGCTCGTTCCGGTCACTATAT-CTGATGAAAAC 27655863 Query 41459 CATTTCGGGCGAGGGAATTACACCACGTGGATTGGCATCAGAGCTGATGAACCGAAGCGG 41518 | |||| || |||| ||||| |||||| || |||||| ||| |||| | | ||||| Sbjct 27655862 AAAATCGGCCGTGGGAGTTACATCACGTGCATAGGCATCTGAGGCGATGCGCTGGAGCGG 27655803 Query 41519 CTAAAGCCAAAGCCTGGAATCAGATATCTTGCTGAACTGTCAGACTTTGAGAAGGAAGAT 41578 ||| |||||| | ||||| || ||||| ||| || || |||| ||||||||||| | Sbjct 27655802 CTAGAGCCAAGTTCGGGAATTAGTTATCTGAGTGATCTCTCGGACTATGAGAAGGAAGTT 27655743 Query 41579 ATCCTCGCATGGTGGAAGCAACAACCATTCGATTTGCAAATACCGGAACATCTCGGTAAC 41638 ||||||| |||| |||||||||| || || || | || |||| |||||| ||| | Sbjct 27655742 ATCCTCGGATGGGGGAAGCAACATGCAGTCTATGGGAGAACGCCGGTCCATCTCTGTACC 27655683 Query 41639 TGCATAT 41645 ||||| Sbjct 27655682 ACCATAT 27655676 >seq1037 Length=21403021 Score = 149 bits (164), Expect = 2e-31 Identities = 260/369 (70%), Gaps = 7/369 (2%) Strand=Plus/Minus Query 4472 CCGCTGATGCTTGAACCCGCCTATGCGCGGGTTTTCTTTTGTGCGCTTGCAGGCCAGCTT 4531 ||||||| ||||| |||||||||| |||| |||| |||||||||| ||||| |||||| Sbjct 17978971 CCGCTGACGCTTGCCCCCGCCTATGAGCGGTGTTTCATTTGTGCGCTCGCAGGGCAGCTT 17978912 Query 4532 GGGATCAGCAGCCTGACGGATGCGGTGTCCGGCGACAGCCTGACTGCCCAGGAGGCACTC 4591 ||||||| | || ||| | |||| | ||||||||||| || | | || | | | || Sbjct 17978911 GGGATCAACGGCATGATGAATGCCGAGTCCGGCGACAACCCGCTGGTTCATTA-GAAGTC 17978853 Query 4592 GCGACGCTGGCATTATCCGGTGATGATGACGGACCACGACAGGCCCGCAGTTATCAGGTC 4651 |||||| ||||||||| | ||| ||| | ||||| || ||||||| | | ||| Sbjct 17978852 GCGACGATGGCATTATGCTTTGAGGATAATAGACCAGGAATGGCCCGCTTTAAACAGAGG 17978793 Query 4652 ATGAACGGCATCGCCGTGCTGCCGGTGTCCGGCA-CGCTGGTCA-GCCGGACGCG-GGCG 4708 ||| |||||||| ||| | |||||||||| | ||| || | || | ||| | Sbjct 17978792 ATGGACGGCATCATGGTGTCGGCGGTGTCCGGAATTGCTTGTTACACCAAATGCGACTAG 17978733 Query 4709 CTGCAGCCGTACTCG-GGGATGACCGGTTACAACGGCATTATCGCCCGTCTGCAACAG-G 4766 || ||||||| ||| || || | |||||| || | | | | |||| ||| | Sbjct 17978732 CTTCAGCCGTTTTCGAAAAATAACTGCTTACAAAAGCGTCAACACAAATCTGGAACTGCC 17978673 Query 4767 CTGCCAGCGATCCGATGGTGGACGGCATTCTGCTCGATATGGACACGCCCGGC-GGGATG 4825 ||||| | | ||||||| ||||||||| | | |||| | | | |||| |||||| Sbjct 17978672 CTGCCCCTAAGCGGATGGTGAACGGCATTCAGATTGATACGAATGATCTCGGCGGGGATG 17978613 Query 4826 GTGGCGGGG 4834 |||| |||| Sbjct 17978612 GTGGGGGGG 17978604 Score = 91.5 bits (100), Expect = 5e-14 Identities = 138/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Minus Query 21560 AATAACACGGGGGCTCATGCTCACAGTCTGAGCGGTTCAACAGGGGC-CGCGGGTGCTCA 21618 || || ||||||| |||||||| | | |||| | || || ||||| | || ||||| Sbjct 11081325 AAAAATACGGGGGTTCATGCTCCCCG-CTGAACAGT--AAATGGGGCACACGCTTGCTCT 11081269 Query 21619 TGCCCACACAAGTGGTTTAAGGATGAACAGTTCTGGCTGGAGTCAGTATGGAACAGCAAC 21678 |||||| ||| || ||| |||||||| |||||||| | | ||| | ||||||| | || Sbjct 11081268 TGCCCATACA-GTCGTT-AAGGATGAGCAGTTCTG-CAGTAGTAATTATGGAAAATTTAC 11081212 Query 21679 CATTACAGGAAGTTTATCCACAGTTAAAGGAA-CCAGCACACAGGGTATTGCTTATTTAT 21737 |||| |||| ||||||| | |||| |||| ||| || |||| |||||||||||| Sbjct 11081211 -ATTATCGGAATTTTATCCG-ACTTAACGGAAACCATCATCCAGGTATTTGCTTATTTAT 11081154 Query 21738 CGAAA 21742 || || Sbjct 11081153 CGCAA 11081149 >seq818 Length=39844632 Score = 147 bits (162), Expect = 7e-31 Identities = 167/212 (79%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 40587 GCTAATAA-CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGTCA 40644 || ||||| |||| |||||| ||||| || |||||| ||| ||||||||||||||| ||| Sbjct 1526871 GCCAATAAGCAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCA 1526930 Query 40645 TGAAAAAACTAACCTTTGA-AATTCGATCTCCAGCACATCAGCAAAACGCT-ATTCACGC 40702 ||| |||||||| | || | ||||||||||| |||||| | | ||||| | |||||| Sbjct 1526931 TGATCCAACTAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGC 1526990 Query 40703 AGTACAGC-AAATCCTTCCAGACCCAACCAA-ACCAATCGTAGTAACCA-TTCAGGAACG 40759 |||||||| | |||||| | || | || ||| || |||||| ||| || |||| ||| | Sbjct 1526991 AGTACAGCTAGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGAA-G 1527048 Query 40760 CAACCGCAGCTTAGACCAAAACAGGAAGCTAT 40791 || |||||||| | ||| ||| |||||||| Sbjct 1527049 GTACTGCAGCTTAAATCAATACACGAAGCTAT 1527080 >seq36428 Length=20637 Score = 120 bits (132), Expect = 9e-23 Identities = 188/268 (70%), Gaps = 1/268 (0%) Strand=Plus/Plus Query 279 TGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGT 338 ||||| || | | |||| ||| || | | | | |||||| | |||| | ||| || Sbjct 12196 TGCGAAGCCGGGACAAGAGTACAGACGCGTTCTGTGACTCCGAAGCCGGCGTAACCTGAG 12255 Query 339 ATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGC 398 ||||||| ||||||||||| |||| |||||| | || | || |||||||||| || ||| Sbjct 12256 ATGCCGAGTGGGATGCTGAACTTGAAAACGAACACCTACCCCAGGAGGTTGAACAAGTGC 12315 Query 399 GGCAGGCCAGCGAGGCAGATCTCCAGCCAGGAACTATTGAGTACGAACGCCATCGACTTA 458 |||||| |||| | ||||| | || | | | ||| || | | ||||| ||||| Sbjct 12316 GGCAGGGACCCGAGACCCATCTCGGGTCACCTAATCTGGAGGACAACCCCCATCCACTTA 12375 Query 459 CGCGTGCGCAGGCCGACGCACAGGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGG 518 ||| | | ||||||||||| ||| |||| ||| | |||| ||| || | ||||| Sbjct 12376 GGCGAGGGACCGCCGACGCACATGAAGTGAATTATGTCGGAGAGTCCCCTAACCAGGTGG 12435 Query 519 AA-ACCGCATTCTGTACTTTCGTGCTGT 545 || || | ||| ||| ||| || ||| Sbjct 12436 AATACGGGGTTCCGTAACTTCATGTTGT 12463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155016482819328