Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq28042 89.7 2e-13 >seq28042 Length=8155 Score = 89.7 bits (98), Expect = 2e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 21546 GACGGCCGCCACGGCGCA-TCGATGTGATGCAGCGCGACGAGGCGGTTTTGGACGTTGGT 21604 |||||| |||||| ||| |||| || ||| | || | | | || || ||||| || Sbjct 6959 GACGGCTTCCACGG-GCAGTCGAGGTTATGGATGGCAATCAATCTGTCCTGCACGTTTGT 6901 Query 21605 ACCGGCGCCCATCTTCGGCGTCGAGCCGAACAGGAACCGGACCCGTCCGGACCTGACCTT 21664 ||| |||||||||||| | || ||||| |||| | || ||| ||| ||| ||||| Sbjct 6900 ACCTGCGCCCATCTTCTGGGTAGAGCCAAACAATACACGCACCTCGCCGCTCCTTACCTT 6841 Query 21665 TCCGAATAGCTCTTCCTTCTGCGCCTGCGTGTTGGCGTCATGGATGAA 21712 | |||| ||||||| ||||| || | || || || ||||||||||| Sbjct 6840 TGCGAACAGCTCTTTTTTCTGTGCGTCGGTATTCGCTTCATGGATGAA 6793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183528717217056